|
|
eF-site ID
|
2e2h-J |
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PDB Code
|
2e2h |
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Chain
|
J |
|
click to enlarge
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Title
|
RNA polymerase II elongation complex at 5 mM Mg2+ with GTP |
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Classification
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TRANSCRIPTION,TRANSFERASE/DNA-RNA HYBRID |
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Compound
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5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3' |
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Source
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ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; |
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Sequence
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J: |
MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLG
LKRYCCRRMILTHVDLIEKFLRYNP
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Description
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Functional site
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|
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1)
|
chain |
J |
| residue |
7 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J 101
|
| source |
: AC7
|
|
|
2)
|
chain |
J |
| residue |
9 |
| type |
|
| sequence |
S
|
| description |
BINDING SITE FOR RESIDUE ZN J 101
|
| source |
: AC7
|
|
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3)
|
chain |
J |
| residue |
10 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J 101
|
| source |
: AC7
|
|
|
4)
|
chain |
J |
| residue |
45 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J 101
|
| source |
: AC7
|
|
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5)
|
chain |
J |
| residue |
46 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J 101
|
| source |
: AC7
|
|
|
6)
|
chain |
J |
| residue |
2-11 |
| type |
prosite |
| sequence |
IVPVRCFSCG
|
| description |
RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG
|
| source |
prosite : PS01112
|
|
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7)
|
chain |
J |
| residue |
45 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
8)
|
chain |
J |
| residue |
46 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
9)
|
chain |
J |
| residue |
10 |
| type |
ZN_FING |
| sequence |
C
|
| description |
C4-type
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|