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eF-site ID
|
2e2h-C |
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PDB Code
|
2e2h |
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Chain
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C |
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click to enlarge
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Title
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RNA polymerase II elongation complex at 5 mM Mg2+ with GTP |
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Classification
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TRANSCRIPTION,TRANSFERASE/DNA-RNA HYBRID |
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Compound
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5'-R(*AP*UP*CP*GP*AP*GP*AP*GP*GP*A)-3' |
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Source
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ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; |
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Sequence
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C: |
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIP
TLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEY
SRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVS
NLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKG
IAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWP
QSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQ
VVVRGIDTLQKKVASILLALTQMDQD
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Description
|
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Functional site
|
|
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1)
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chain |
C |
| residue |
86 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN C 319
|
| source |
: AC4
|
|
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2)
|
chain |
C |
| residue |
88 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN C 319
|
| source |
: AC4
|
|
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3)
|
chain |
C |
| residue |
92 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN C 319
|
| source |
: AC4
|
|
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4)
|
chain |
C |
| residue |
95 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN C 319
|
| source |
: AC4
|
|
|
5)
|
chain |
C |
| residue |
31-71 |
| type |
prosite |
| sequence |
NSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLI
P
|
| description |
RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSLRRvmiaeiptlAidsVevetNtTvlaDEfIAhRLGLIP
|
| source |
prosite : PS00446
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