eF-site ID 2dy3-D
PDB Code 2dy3
Chain D

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Title Crystal Structure of alanine racemase from Corynebacterium glutamicum
Classification ISOMERASE
Compound Alanine racemase
Source Corynebacterium glutamicum (Brevibacterium flavum) (ALR_CORGL)
Sequence D:  MNLLTTKIDLDAIAHNTRVLKQMAGPAKLMAVVKANAYNH
GVEKVAPVIAAHGADAFGVATLAEAMQLRDIGISQEVLCW
IWTPEQDFRAAIDRNIDLAVISPAHAKALIETDAEHIRVS
IKIDSGLHRSGVDEQEWEGVFSALAAAPHIEVTGMFTHLA
CADEPTDRQIIAFRRALALARKHGLECPVNHVCNSPAFLT
RSDLHMEMVRPGLAFYGLEPVAGLEHGLKPAMTWEAKVSV
VKQIEAGQGFVAVVPAGYADGMPRHAQGKFSVTIDGLDYP
QVGRVCMDQFVISLGDNPHGVEAGAKAVIFGENGHDATDF
AERLDTINYEVVCRPTGRTVRAYV
Description


Functional site

1) chain D
residue 32
type
sequence V
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

2) chain D
residue 34
type
sequence K
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

3) chain D
residue 38
type
sequence Y
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

4) chain D
residue 80
type
sequence W
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

5) chain D
residue 158
type
sequence H
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

6) chain D
residue 198
type
sequence N
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

7) chain D
residue 199
type
sequence S
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

8) chain D
residue 214
type
sequence R
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

9) chain D
residue 215
type
sequence P
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

10) chain D
residue 216
type
sequence G
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

11) chain D
residue 217
type
sequence L
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

12) chain D
residue 346
type
sequence Y
description BINDING SITE FOR RESIDUE PLP D 401
source : AC4

13) chain D
residue 34
type ACT_SITE
sequence K
description Proton acceptor; specific for D-alanine => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI1

14) chain D
residue 129
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI3

15) chain D
residue 304
type BINDING
sequence M
description BINDING => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI3

16) chain D
residue 34
type MOD_RES
sequence K
description N6-(pyridoxal phosphate)lysine
source Swiss-Prot : SWS_FT_FI4


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