eF-site ID 2dy3-C
PDB Code 2dy3
Chain C

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Title Crystal Structure of alanine racemase from Corynebacterium glutamicum
Classification ISOMERASE
Compound Alanine racemase
Source Corynebacterium glutamicum (Brevibacterium flavum) (ALR_CORGL)
Sequence C:  MNLLTTKIDLDAIAHNTRVLKQMAGPAKLMAVVKANAYNH
GVEKVAPVIAAHGADAFGVATLAEAMQLRDIGISQEVLCW
IWTPEQDFRAAIDRNIDLAVISPAHAKALIETDAEHIRVS
IKIDSGLHRSGVDEQEWEGVFSALAAAPHIEVTGMFTHLA
CADEPPETDRQIIAFRRALALARKHGLECPVNHVCNSPAF
LTRSDLHMEMVRPGLAFYGLEPVAGLEHGLKPAMTWEAKV
SVVKQIRGFVAVVPAGYADGMPRHAQGKFSVTIDGLDYPQ
VGRVCMDQFVISLGDNPHGVEAGAKAVIFGENGHDATDFA
ERLDTINYEVVCRPTGRTVRAYV
Description


Functional site

1) chain C
residue 32
type
sequence V
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

2) chain C
residue 34
type
sequence K
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

3) chain C
residue 38
type
sequence Y
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

4) chain C
residue 80
type
sequence W
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

5) chain C
residue 158
type
sequence H
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

6) chain C
residue 198
type
sequence N
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

7) chain C
residue 199
type
sequence S
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

8) chain C
residue 200
type
sequence P
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

9) chain C
residue 214
type
sequence R
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

10) chain C
residue 215
type
sequence P
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

11) chain C
residue 216
type
sequence G
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

12) chain C
residue 217
type
sequence L
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

13) chain C
residue 346
type
sequence Y
description BINDING SITE FOR RESIDUE PLP C 401
source : AC3

14) chain C
residue 34
type ACT_SITE
sequence K
description Proton acceptor; specific for D-alanine => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI1

15) chain C
residue 129
type BINDING
sequence R
description BINDING => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI3

16) chain C
residue 304
type BINDING
sequence M
description BINDING => ECO:0000255|HAMAP-Rule:MF_01201
source Swiss-Prot : SWS_FT_FI3

17) chain C
residue 34
type MOD_RES
sequence K
description N6-(pyridoxal phosphate)lysine
source Swiss-Prot : SWS_FT_FI4


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