eF-site ID 2d3o-1RSW
PDB Code 2d3o
Chain 1, R, S, W

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Title Structure of Ribosome Binding Domain of the Trigger Factor on the 50S ribosomal subunit from D. radiodurans
Classification RIBOSOME
Compound 23S RIBOSOMAL RNA
Source ORGANISM_SCIENTIFIC: Deinococcus radiodurans;
Sequence 1:  NKVEFKVSVPAAEVNRAYDQVWAGLARDVRVPGFRPGKAP
RKVIENRVGKGYVESQVRDRLLETHYSQGLRELGLNLVDA
TVDPQDVQSGQAFEFTVKGE
R:  SHYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDA
IQQAFGVRVIGISTMNVPGKRKRVGRFIGQRNDRKKAIVR
LAEGQSIEALAGQ
S:  PSAGSHHNDKLHFKKGDTVIVLSGKHKGQTGKVLLALPRD
QKVVVEGVNVITKNVKPSMTNPQGGQEQRELALHASKVAL
VDPETGKATRVRKQIVDGKKVRVAVASGKT
W:  MKPSEMRNLQATDFAKEIDARKKELMELRFQAAAGQLAQP
HRVRQLRREVAQLNTVKAELARKGEQ
Description


Functional site

1) chain R
residue 76-91
type prosite
sequence KKAIVRLAEGQSIEAL
description RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAIVRLAegqsieaL
source prosite : PS00050

2) chain W
residue 39-53
type prosite
sequence QPHRVRQLRREVAQL
description RIBOSOMAL_L29 Ribosomal protein L29 signature. QPHRVRqLRREVAQL
source prosite : PS00579

3) chain S
residue 19-36
type prosite
sequence GDTVIVLSGKHKGQTGKV
description RIBOSOMAL_L24 Ribosomal protein L24 signature. GDtViVLsGkhKGqt.GkV
source prosite : PS01108


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