|
eF-site ID
|
2d3o-1RSW |
PDB Code
|
2d3o |
Chain
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1, R, S, W |
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click to enlarge
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Title
|
Structure of Ribosome Binding Domain of the Trigger Factor on the 50S ribosomal subunit from D. radiodurans |
Classification
|
RIBOSOME |
Compound
|
23S RIBOSOMAL RNA |
Source
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ORGANISM_SCIENTIFIC: Deinococcus radiodurans; |
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Sequence
|
1: |
NKVEFKVSVPAAEVNRAYDQVWAGLARDVRVPGFRPGKAP
RKVIENRVGKGYVESQVRDRLLETHYSQGLRELGLNLVDA
TVDPQDVQSGQAFEFTVKGE
|
R: |
SHYDILQAPVISEKAYSAMERGVYSFWVSPKATKTEIKDA
IQQAFGVRVIGISTMNVPGKRKRVGRFIGQRNDRKKAIVR
LAEGQSIEALAGQ
|
S: |
PSAGSHHNDKLHFKKGDTVIVLSGKHKGQTGKVLLALPRD
QKVVVEGVNVITKNVKPSMTNPQGGQEQRELALHASKVAL
VDPETGKATRVRKQIVDGKKVRVAVASGKT
|
W: |
MKPSEMRNLQATDFAKEIDARKKELMELRFQAAAGQLAQP
HRVRQLRREVAQLNTVKAELARKGEQ
|
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Description
|
|
Functional site
|
|
1)
|
chain |
R |
residue |
76-91 |
type |
prosite |
sequence |
KKAIVRLAEGQSIEAL
|
description |
RIBOSOMAL_L23 Ribosomal protein L23 signature. KKAIVRLAegqsieaL
|
source |
prosite : PS00050
|
|
2)
|
chain |
W |
residue |
39-53 |
type |
prosite |
sequence |
QPHRVRQLRREVAQL
|
description |
RIBOSOMAL_L29 Ribosomal protein L29 signature. QPHRVRqLRREVAQL
|
source |
prosite : PS00579
|
|
3)
|
chain |
S |
residue |
19-36 |
type |
prosite |
sequence |
GDTVIVLSGKHKGQTGKV
|
description |
RIBOSOMAL_L24 Ribosomal protein L24 signature. GDtViVLsGkhKGqt.GkV
|
source |
prosite : PS01108
|
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