eF-site ID 2cja-A
PDB Code 2cja
Chain A

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Title Crystal structure of Methanosarcina barkeri seryl-tRNA synthetase complexed with ATP
Classification LIGASE
Compound SERYL-TRNA SYNTHETASE
Source Methanosarcina barkeri (strain Fusaro / DSM 804) (Q46AN5_METBA)
Sequence A:  SHXKLQFNLKAYFKKDAIAALFEEANSTLLTRGAPEGQGA
KVTEWKLRIELTLQSGRYVRVHDAIFRLRKQLAEALGKKY
KIGIRGIEVESFIIKVPADHELRXLKVPYIKSXENIEGGI
QLELEVGEAEXKNRVPDRILTLLEEKIEAAQYGAKAEHWN
LLWQREPXEHPFKEDPTQAXXKEGWLKRGSSRGQWIHGPQ
SARIFRTFEKIVLEELLEPLGYREXIFPKLVTWEVWXKSG
HAKGVYPEIYYVCPPQTRDPDYWEEVADYYKVTHEVPTKL
IKEKIAEPIGGXCYAQCPPFWXYVAGETLPNEEIPVKVFD
RSGTSHRYESGGIHGIERVDEFHRIEIVWIGTKEEVLKCA
EELHDRYXHIFNDILDIEWRKARVNTVGTTDYEACLPYRG
PDGEWLEFQNVSINGDKYPKGFNVKLQSGDELWSGCSGVG
LERWAAVFLAQKGLDPANWPEEFRNRVGEXPKGIRFL
Description (1)  SERYL-TRNA SYNTHETASE (E.C.6.1.1.11)


Functional site

1) chain A
residue 304
type
sequence A
description BINDING SITE FOR RESIDUE ZN A1503
source : AC1

2) chain A
residue 306
type
sequence C
description BINDING SITE FOR RESIDUE ZN A1503
source : AC1

3) chain A
residue 355
type
sequence E
description BINDING SITE FOR RESIDUE ZN A1503
source : AC1

4) chain A
residue 461
type
sequence C
description BINDING SITE FOR RESIDUE ZN A1503
source : AC1

5) chain A
residue 245
type
sequence W
description BINDING SITE FOR RESIDUE CL A1504
source : AC2

6) chain A
residue 303
type
sequence Y
description BINDING SITE FOR RESIDUE CL A1504
source : AC2

7) chain A
residue 304
type
sequence A
description BINDING SITE FOR RESIDUE CL A1504
source : AC2

8) chain A
residue 305
type
sequence Q
description BINDING SITE FOR RESIDUE CL A1504
source : AC2

9) chain A
residue 250
type
sequence H
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

10) chain A
residue 303
type
sequence Y
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

11) chain A
residue 304
type
sequence A
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

12) chain A
residue 336
type
sequence R
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

13) chain A
residue 338
type
sequence E
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

14) chain A
residue 348
type
sequence V
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

15) chain A
residue 351
type
sequence F
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

16) chain A
residue 353
type
sequence R
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

17) chain A
residue 432
type
sequence E
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

18) chain A
residue 435
type
sequence N
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

19) chain A
residue 465
type
sequence G
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

20) chain A
residue 468
type
sequence R
description BINDING SITE FOR RESIDUE ATP A1505
source : AC7

21) chain A
residue 306
type catalytic
sequence C
description 885
source MCSA : MCSA1

22) chain A
residue 468
type catalytic
sequence R
description 885
source MCSA : MCSA1

23) chain A
residue 336
type catalytic
sequence R
description 885
source MCSA : MCSA1

24) chain A
residue 338
type catalytic
sequence E
description 885
source MCSA : MCSA1

25) chain A
residue 347
type catalytic
sequence R
description 885
source MCSA : MCSA1

26) chain A
residue 355
type catalytic
sequence E
description 885
source MCSA : MCSA1

27) chain A
residue 416
type catalytic
sequence D
description 885
source MCSA : MCSA1

28) chain A
residue 432
type catalytic
sequence E
description 885
source MCSA : MCSA1

29) chain A
residue 435
type catalytic
sequence N
description 885
source MCSA : MCSA1

30) chain A
residue 461
type catalytic
sequence C
description 885
source MCSA : MCSA1

31) chain A
residue 304
type BINDING
sequence A
description
source Swiss-Prot : SWS_FT_FI1

32) chain A
residue 432
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

33) chain A
residue 435
type BINDING
sequence N
description
source Swiss-Prot : SWS_FT_FI1

34) chain A
residue 461
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

35) chain A
residue 468
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI1

36) chain A
residue 306
type BINDING
sequence C
description
source Swiss-Prot : SWS_FT_FI1

37) chain A
residue 336
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI1

38) chain A
residue 338
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

39) chain A
residue 347
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI1

40) chain A
residue 353
type BINDING
sequence R
description
source Swiss-Prot : SWS_FT_FI1

41) chain A
residue 355
type BINDING
sequence E
description
source Swiss-Prot : SWS_FT_FI1

42) chain A
residue 416
type BINDING
sequence D
description
source Swiss-Prot : SWS_FT_FI1


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