eF-site ID 2cik-B
PDB Code 2cik
Chain B

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Title Insights Into Crossreactivity in Human Allorecognition: The Structure of HLA-B35011 Presenting an Epitope derived from Cytochrome P450.
Classification IMMUNE SYSTEM/PEPTIDE
Compound HLA CLASS I HISTOCOMPATIBILITY ANTIGEN B-35 ALPHA CHAIN
Source Homo sapiens (Human) (2CIK)
Sequence B:  IQRTPKIQVYSRHPAENGKSNFLNCYVSGFHPSDIEVDLL
KNGERIEKVEHSDLSFSKDWSFYLLYYTEFTPTEKDEYAC
RVNHVTLSQPKIVKWDRDM
Description


Functional site

1) chain B
residue 63
type
sequence Y
description BINDING SITE FOR RESIDUE GOL A1277
source : AC1

2) chain B
residue 33
type
sequence S
description BINDING SITE FOR RESIDUE GOL B1100
source : AC2

3) chain B
residue 34
type
sequence D
description BINDING SITE FOR RESIDUE GOL B1100
source : AC2

4) chain B
residue 10
type
sequence Y
description BINDING SITE FOR RESIDUE GOL B1101
source : AC3

5) chain B
residue 11
type
sequence S
description BINDING SITE FOR RESIDUE GOL B1101
source : AC3

6) chain B
residue 13
type
sequence H
description BINDING SITE FOR RESIDUE GOL B1101
source : AC3

7) chain B
residue 14
type
sequence P
description BINDING SITE FOR RESIDUE GOL B1101
source : AC3

8) chain B
residue 97
type
sequence R
description BINDING SITE FOR RESIDUE GOL B1101
source : AC3

9) chain B
residue 2
type MOD_RES
sequence Q
description Pyrrolidone carboxylic acid; in form pI 5.3 => ECO:0000269|PubMed:7554280
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 78-84
type prosite
sequence YACRVNH
description IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YTCHVQH
source prosite : PS00290

11) chain B
residue 1
type CARBOHYD
sequence I
description N-linked (Glc) (glycation) isoleucine; in hemodialysis-associated amyloidosis => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI2

12) chain B
residue 19
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

13) chain B
residue 41
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

14) chain B
residue 48
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

15) chain B
residue 58
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

16) chain B
residue 91
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3

17) chain B
residue 94
type CARBOHYD
sequence K
description N-linked (Glc) (glycation) lysine; in vitro => ECO:0000269|PubMed:7918443
source Swiss-Prot : SWS_FT_FI3


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