eF-site ID 2cde-ABCDEF PDB Code 2cde Chain A, B, C, D, E, F click to enlarge Title Structure and binding kinetics of three different human CD1d-alpha- Galactosylceramide specific T cell receptors - iNKT-TCR Classification CELL RECEPTOR Compound INKT-TCR Source (2CDE) Sequence A:  NQVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTG RGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQ LSDSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQKPDP AVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDK TVLDMRSMDFKSNSAVAWSNKSDFACANAFNN B:  EADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPG MELHLIHYSYGVNSTEKGDLSSESTVSRIRTEHFPLTLES ARPSHTSQYLCASSENIGTAYEQYFGPGTRLTVTEDLKNV FPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW VNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATF WQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAW GRAD C:  NQVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTG RGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQ LSDSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQKPDP AVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDK TVLDMRSMDFKSNSAVAWSNKSDFACANAFNN D:  EADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPG MELHLIHYSYGVNSTEKGDLSSESTVSRIRTEHFPLTLES ARPSHTSQYLCASSENIGTAYEQYFGPGTRLTVTEDLKNV FPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW VNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATF WQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAW GRAD E:  NQVEQSPQSLIILEGKNCTLQCNYTVSPFSNLRWYKQDTG RGPVSLTIMTFSENTKSNGRYTATLDADTKQSSLHITASQ LSDSASYICVVSDRGSTLGRLYFGRGTQLTVWPDIQKPDP AVYQLRDSKSSDKSVCLFTDFDSQTNVSQSKDSDVYITDK TVLDMRSMDFKSNSAVAWSNKSDFACANAFNN F:  EADIYQTPRYLVIGTGKKITLECSQTMGHDKMYWYQQDPG MELHLIHYSYGVNSTEKGDLSSESTVSRIRTEHFPLTLES ARPSHTSQYLCASSENIGTAYEQYFGPGTRLTVTEDLKNV FPPEVAVFEPSEAEISHTQKATLVCLATGFYPDHVELSWW VNGKEVHSGVSTDPQPLKEQPALNDSRYALSSRLRVSATF WQDPRNHFRCQVQFYGLSENDEWTQDRAKPVTQIVSAEAW GRAD Description Functional site 1) chain B residue 185 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000255|PROSITE-ProRule:PRU00498 source Swiss-Prot : SWS_FT_FI1 2) chain D residue 185 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000255|PROSITE-ProRule:PRU00498 source Swiss-Prot : SWS_FT_FI1 3) chain F residue 185 type CARBOHYD sequence N description N-linked (GlcNAc...) asparagine => ECO:0000255|PROSITE-ProRule:PRU00498 source Swiss-Prot : SWS_FT_FI1

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