eF-site ID 2cci-ABCDFI PDB Code 2cci Chain A, B, C, D, F, I click to enlarge Title Crystal structure of phospho-CDK2 Cyclin A in complex with a peptide containing both the substrate and recruitment sites of CDC6 Classification CELL CYCLE Compound Cyclin-dependent kinase 2 Source (CDC6_HUMAN) Sequence A:  SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA ALAHPFFQDVTKPVPHL B:  VPDYHEDIHTYLREMEVKCKPKVGYMKKQPDITNSMRAIL VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQ LVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRM EHLVLKVLTFDLAAPTVNQFLTQYFLHQQPANCKVESLAM FLGELSLIDADPYLKYLPSVIAGAAFHLALYTVTGQSWPE SLIRKTGYTLESLKPCLMDLHQTYLKAPQHAQQSIREKYK NSKYHGVSLLNPPETLNL C:  SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDT ETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLV FEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCH SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTY XHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTR RALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDYKPS FPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA ALAHPFFQDVTKPVPHL D:  VPDYHEDIHTYLREMEVKCKPKVGYMKKQPDITNSMRAIL VDWLVEVGEEYKLQNETLHLAVNYIDRFLSSMSVLRGKLQ LVGTAAMLLASKFEEIYPPEVAEFVYITDDTYTKKQVLRM EHLVLKVLTFDLAAPTVNQFLTQYFLHQQPANCKVESLAM FLGELSLIDADPYLKYLPSVIAGAAFHLALYTVTGQSWPE SLIRKTGYTLESLKPCLMDLHQTYLKAPQHAQQSIREKYK NSKYHGVSLLNPPETLNL F:  HHASPRKHTLKGRRLVFDN I:  ASPRKTLKGRRLVF Description Functional site 1) chain A residue 132 type sequence N description BINDING SITE FOR RESIDUE MG A1298 source : AC1 2) chain A residue 145 type sequence D description BINDING SITE FOR RESIDUE MG A1298 source : AC1 3) chain C residue 129 type sequence K description BINDING SITE FOR RESIDUE MG C1298 source : AC2 4) chain C residue 132 type sequence N description BINDING SITE FOR RESIDUE MG C1298 source : AC2 5) chain C residue 145 type sequence D description BINDING SITE FOR RESIDUE MG C1298 source : AC2 6) chain A residue 11 type sequence G description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 7) chain A residue 12 type sequence E description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 8) chain A residue 13 type sequence G description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 9) chain A residue 14 type sequence T description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 10) chain A residue 31 type sequence A description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 11) chain A residue 33 type sequence K description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 12) chain A residue 80 type sequence F description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 13) chain A residue 81 type sequence E description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 14) chain A residue 82 type sequence F description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 15) chain A residue 83 type sequence L description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 16) chain A residue 86 type sequence D description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 17) chain A residue 131 type sequence Q description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 18) chain A residue 132 type sequence N description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 19) chain A residue 134 type sequence L description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 20) chain A residue 145 type sequence D description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 21) chain F residue 72 type sequence R description BINDING SITE FOR RESIDUE ATP A1297 source : AC3 22) chain C residue 10 type sequence I description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 23) chain C residue 11 type sequence G description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 24) chain C residue 13 type sequence G description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 25) chain C residue 14 type sequence T description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 26) chain C residue 31 type sequence A description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 27) chain C residue 33 type sequence K description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 28) chain C residue 81 type sequence E description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 29) chain C residue 83 type sequence L description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 30) chain C residue 86 type sequence D description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 31) chain C residue 131 type sequence Q description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 32) chain C residue 132 type sequence N description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 33) chain C residue 134 type sequence L description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 34) chain C residue 145 type sequence D description BINDING SITE FOR RESIDUE ATP C1297 source : AC4 35) chain A residue 10 type BINDING sequence I description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI2 36) chain C residue 129 type BINDING sequence K description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI2 37) chain A residue 33 type BINDING sequence K description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI2 38) chain A residue 81 type BINDING sequence E description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI2 39) chain A residue 86 type BINDING sequence D description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI2 40) chain A residue 129 type BINDING sequence K description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI2 41) chain C residue 10 type BINDING sequence I description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI2 42) chain C residue 33 type BINDING sequence K description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI2 43) chain C residue 81 type BINDING sequence E description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI2 44) chain C residue 86 type BINDING sequence D description BINDING => ECO:0000255|PROSITE-ProRule:PRU00159, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI2 45) chain A residue 132 type BINDING sequence N description BINDING => ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI3 46) chain A residue 145 type BINDING sequence D description BINDING => ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI3 47) chain C residue 132 type BINDING sequence N description BINDING => ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI3 48) chain C residue 145 type BINDING sequence D description BINDING => ECO:0000269|PubMed:21565702 source Swiss-Prot : SWS_FT_FI3 49) chain A residue 1 type MOD_RES sequence M description N-acetylmethionine => ECO:0007744|PubMed:22814378 source Swiss-Prot : SWS_FT_FI5 50) chain C residue 1 type MOD_RES sequence M description N-acetylmethionine => ECO:0007744|PubMed:22814378 source Swiss-Prot : SWS_FT_FI5 51) chain F residue 70 type MOD_RES sequence S description Phosphoserine => ECO:0000250|UniProtKB:O89033 source Swiss-Prot : SWS_FT_FI1 52) chain I residue 70 type MOD_RES sequence S description Phosphoserine => ECO:0000250|UniProtKB:O89033 source Swiss-Prot : SWS_FT_FI1 53) chain B residue 211-242 type prosite sequence RAILVDWLVEVGEEYKLQNETLHLAVNYIDRF description CYCLINS Cyclins signature. RaiLvdWLvevgeeykLqnetLhlAVnYIDRF source prosite : PS00292 54) chain A residue 10-33 type prosite sequence IGEGTYGVVYKARNKLTGEVVALK description PROTEIN_KINASE_ATP Protein kinases ATP-binding region signature. IGEGTYGVVYkArnkltgev..........VALK source prosite : PS00107 55) chain A residue 123-135 type prosite sequence VLHRDLKPQNLLI description PROTEIN_KINASE_ST Serine/Threonine protein kinases active-site signature. VlHrDLKpqNLLI source prosite : PS00108 56) chain A residue 160 type MOD_RES sequence X description Phosphothreonine; by CAK and CCRK => ECO:0000269|PubMed:1396589, ECO:0000269|PubMed:14597612, ECO:0000269|PubMed:16325401, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:17570665, ECO:0000269|PubMed:20147522, ECO:0000269|PubMed:20360007, ECO:0000269|PubMed:21565702, ECO:0000305|PubMed:28666995 source Swiss-Prot : SWS_FT_FI10 57) chain C residue 160 type MOD_RES sequence X description Phosphothreonine; by CAK and CCRK => ECO:0000269|PubMed:1396589, ECO:0000269|PubMed:14597612, ECO:0000269|PubMed:16325401, ECO:0000269|PubMed:17095507, ECO:0000269|PubMed:17570665, ECO:0000269|PubMed:20147522, ECO:0000269|PubMed:20360007, ECO:0000269|PubMed:21565702, ECO:0000305|PubMed:28666995 source Swiss-Prot : SWS_FT_FI10 58) chain A residue 9 type SITE sequence K description CDK7 binding source Swiss-Prot : SWS_FT_FI4 59) chain A residue 88 type SITE sequence K description CDK7 binding source Swiss-Prot : SWS_FT_FI4 60) chain A residue 166 type SITE sequence L description CDK7 binding source Swiss-Prot : SWS_FT_FI4 61) chain C residue 9 type SITE sequence K description CDK7 binding source Swiss-Prot : SWS_FT_FI4 62) chain C residue 88 type SITE sequence K description CDK7 binding source Swiss-Prot : SWS_FT_FI4 63) chain C residue 166 type SITE sequence L description CDK7 binding source Swiss-Prot : SWS_FT_FI4 64) chain A residue 6 type MOD_RES sequence K description N6-acetyllysine => ECO:0007744|PubMed:19608861 source Swiss-Prot : SWS_FT_FI6 65) chain C residue 6 type MOD_RES sequence K description N6-acetyllysine => ECO:0007744|PubMed:19608861 source Swiss-Prot : SWS_FT_FI6 66) chain A residue 14 type MOD_RES sequence T description Phosphothreonine => ECO:0000269|PubMed:1396589, ECO:0000269|PubMed:17095507 source Swiss-Prot : SWS_FT_FI7 67) chain C residue 14 type MOD_RES sequence T description Phosphothreonine => ECO:0000269|PubMed:1396589, ECO:0000269|PubMed:17095507 source Swiss-Prot : SWS_FT_FI7 68) chain A residue 15 type MOD_RES sequence Y description Phosphotyrosine; by WEE1 => ECO:0000269|PubMed:1396589, ECO:0000269|PubMed:17095507, ECO:0007744|PubMed:19690332 source Swiss-Prot : SWS_FT_FI8 69) chain C residue 15 type MOD_RES sequence Y description Phosphotyrosine; by WEE1 => ECO:0000269|PubMed:1396589, ECO:0000269|PubMed:17095507, ECO:0007744|PubMed:19690332 source Swiss-Prot : SWS_FT_FI8 70) chain A residue 19 type MOD_RES sequence Y description Phosphotyrosine => ECO:0007744|PubMed:19369195 source Swiss-Prot : SWS_FT_FI9 71) chain C residue 19 type MOD_RES sequence Y description Phosphotyrosine => ECO:0007744|PubMed:19369195 source Swiss-Prot : SWS_FT_FI9

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