|
eF-site ID
|
2c8n-C |
PDB Code
|
2c8n |
Chain
|
C |
|
click to enlarge
|
|
Title
|
The Structure of a family 51 arabinofuranosidase, Araf51, from Clostridium thermocellum in complex with 1,3-linked arabinoside of xylobiose. |
Classification
|
HYDROLASE |
Compound
|
ALPHA-L-ARABINOFURANOSIDASE |
Source
|
(Q4CJG5_CLOTM) |
|
Sequence
|
C: |
ARMTVDKDYKIAEIDKRIYGSFVEHLGRAVYDGLYQPGNS
KSDEDGFRKDVIELVKELNVPIIRYPGGNFVSNYFWEDGV
GPVEDRPRRLDLAWKSIEPNQVGINEFAKWCKKVNAEIMM
AVNLGTRGISDACNLLEYCNHPGGSKYSDMRIKHGVKEPH
NIKVWCLGNAMDGPWQVGHKTMDEYGRIAEETARAMKMID
PSIELVACGSSSKDMPTFPQWEATVLDYAYDYVDYISLHQ
YYGNKENDTADFLAKSDDLDDFIRSVIATCDYIKAKKRSK
KDIYLSFDEWNVWYHSNNEDANIMQNEPWRIAPPLLEDIY
TFEDALLVGLMLITLMKHADRIKIACLAQLINVIAPIVTE
RNGGAAWRQTIFYPFMHASKYGRGIVLQPVINSPLHDTSK
HEDVTDIESVAIYNEEKEEVTIFAVNRNIHEDIVLVSDVR
GMKDYRLLEHIVLEHQDLKIRNSVNGEEVYPKNSDKSSFD
DGILTSMLRRASWNVIRIG
|
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Description
|
|
Functional site
|
|
1)
|
chain |
C |
residue |
173 |
type |
ACT_SITE |
sequence |
A
|
description |
Proton donor/acceptor => ECO:0000305|PubMed:16336192
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
2)
|
chain |
C |
residue |
292 |
type |
ACT_SITE |
sequence |
E
|
description |
Nucleophile => ECO:0000269|PubMed:16336192
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
3)
|
chain |
C |
residue |
72 |
type |
BINDING |
sequence |
N
|
description |
BINDING => ECO:0000269|Ref.3, ECO:0000305|PubMed:16336192, ECO:0007744|PDB:2C7F, ECO:0007744|PDB:2C8N, ECO:0007744|PDB:5O80, ECO:0007744|PDB:5O82
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
4)
|
chain |
C |
residue |
244 |
type |
BINDING |
sequence |
Y
|
description |
BINDING => ECO:0000269|Ref.3, ECO:0000305|PubMed:16336192, ECO:0007744|PDB:2C7F, ECO:0007744|PDB:2C8N, ECO:0007744|PDB:5O80, ECO:0007744|PDB:5O82
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
5)
|
chain |
C |
residue |
292 |
type |
BINDING |
sequence |
E
|
description |
BINDING => ECO:0000269|Ref.3, ECO:0000305|PubMed:16336192, ECO:0007744|PDB:2C7F, ECO:0007744|PDB:2C8N, ECO:0007744|PDB:5O80, ECO:0007744|PDB:5O82
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
6)
|
chain |
C |
residue |
27 |
type |
BINDING |
sequence |
E
|
description |
BINDING => ECO:0000269|Ref.3, ECO:0000305|PubMed:16336192, ECO:0007744|PDB:2C7F, ECO:0007744|PDB:2C8N, ECO:0007744|PDB:5O80, ECO:0007744|PDB:5O82
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
7)
|
chain |
C |
residue |
172 |
type |
BINDING |
sequence |
N
|
description |
BINDING => ECO:0000269|Ref.3, ECO:0000305|PubMed:16336192, ECO:0007744|PDB:2C7F, ECO:0007744|PDB:5O82
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
8)
|
chain |
C |
residue |
352 |
type |
BINDING |
sequence |
Q
|
description |
BINDING => ECO:0000269|Ref.3, ECO:0000305|PubMed:16336192, ECO:0007744|PDB:2C8N, ECO:0007744|PDB:5O80
|
source |
Swiss-Prot : SWS_FT_FI5
|
|
9)
|
chain |
C |
residue |
296 |
type |
SITE |
sequence |
W
|
description |
Important for substrate recognition => ECO:0000250|UniProtKB:Q9XBQ3
|
source |
Swiss-Prot : SWS_FT_FI6
|
|
10)
|
chain |
C |
residue |
352 |
type |
SITE |
sequence |
Q
|
description |
Important for substrate recognition => ECO:0000250|UniProtKB:Q9XBQ3
|
source |
Swiss-Prot : SWS_FT_FI6
|
|
|
|