eF-site ID 2c7m-AB
PDB Code 2c7m
Chain A, B

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Title Human Rabex-5 residues 1-74 in complex with Ubiquitin
Classification PROTEIN BINDING
Compound RAB GUANINE NUCLEOTIDE EXCHANGE FACTOR 1
Source ORGANISM_COMMON: BOVINE; ORGANISM_SCIENTIFIC: BOS TAURUS;
Sequence A:  LLCKKGCGYYGNPAWQGFCSKCWREEYHKARQKQIQEDWE
LAERLQREEEEAFASSQS
B:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLR
Description (1)  RAB GUANINE NUCLEOTIDE EXCHANGE FACTOR 1, UBIQUITIN


Functional site

1) chain A
residue 20
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 500
source : AC1

2) chain A
residue 24
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 500
source : AC1

3) chain A
residue 36
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 500
source : AC1

4) chain A
residue 39
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 500
source : AC1

5) chain B
residue 68
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

6) chain A
residue 24
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

7) chain A
residue 36
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

8) chain A
residue 39
type SITE
sequence C
description Essential for function
source Swiss-Prot : SWS_FT_FI2

9) chain B
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI3

10) chain B
residue 54
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

11) chain B
residue 72
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

12) chain B
residue 27-52
type prosite
sequence KAKIQDKEGIPPDQQRLIFAGKQLED
description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
source prosite : PS00299

13) chain B
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

14) chain B
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

15) chain B
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

16) chain B
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

17) chain B
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

18) chain B
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5

19) chain B
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5


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