eF-site ID 2c38-V
PDB Code 2c38
Chain V

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Title RNase PH core of the archaeal exosome in complex with A5 RNA
Classification HYDROLASE
Compound PROBABLE EXOSOME COMPLEX EXONUCLEASE 2
Source Sulfolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2) (ECX1_SULSO)
Sequence V:  RPKLILDDGKRTDGRKPDELRSIKIELGVLKNADGSAIFE
MGNTKAIAAVYGPKEMHPRHLSLPDRAVLRVRYHMTPFST
DERKNPAPSRREIELSKVIREALESAVLVELFPRTAIDVF
TEILQADAGSRLVSLMAASLALADAGIPMRDLIAGVAVGK
ADGVIILDLNETEDMWGEADMPIAMMPSLNQVTLFQLNGS
MTPDEFRQAFDLAVKGINIIYNLEREALKSKYVEFKEEG
Description


Functional site

1) chain V
residue 99
type
sequence R
description BINDING SITE FOR RESIDUE CL V 301
source : BC2

2) chain V
residue 137
type
sequence G
description BINDING SITE FOR RESIDUE CL V 301
source : BC2

3) chain V
residue 138
type
sequence S
description BINDING SITE FOR RESIDUE CL V 301
source : BC2

4) chain V
residue 139
type
sequence R
description BINDING SITE FOR RESIDUE CL V 301
source : BC2

5) chain V
residue 98
type
sequence R
description BINDING SITE FOR RESIDUE AMP V 401
source : DC6

6) chain V
residue 98
type
sequence R
description BINDING SITE FOR RESIDUE AMP V 402
source : DC7

7) chain V
residue 182
type
sequence D
description BINDING SITE FOR RESIDUE AMP V 403
source : DC8

8) chain V
residue 88
type
sequence T
description BINDING SITE FOR RESIDUE AMP V 404
source : DC9

9) chain V
residue 99
type
sequence R
description BINDING SITE FOR RESIDUE AMP V 404
source : DC9

10) chain V
residue 134
type
sequence A
description BINDING SITE FOR RESIDUE AMP V 404
source : DC9

11) chain V
residue 135
type
sequence D
description BINDING SITE FOR RESIDUE AMP V 404
source : DC9

12) chain V
residue 136
type
sequence A
description BINDING SITE FOR RESIDUE AMP V 404
source : DC9

13) chain V
residue 138
type
sequence S
description BINDING SITE FOR RESIDUE AMP V 404
source : DC9

14) chain V
residue 139
type
sequence R
description BINDING SITE FOR RESIDUE AMP V 404
source : DC9

15) chain V
residue 179
type
sequence E
description BINDING SITE FOR RESIDUE AMP V 404
source : DC9

16) chain V
residue 182
type
sequence D
description BINDING SITE FOR RESIDUE AMP V 404
source : DC9

17) chain V
residue 188
type
sequence D
description BINDING SITE FOR RESIDUE AMP V 404
source : DC9


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