eF-site ID 2c0z-A
PDB Code 2c0z
Chain A

click to enlarge
Title The 1.6 A resolution crystal structure of NovW: a 4-keto-6-deoxy sugar epimerase from the novobiocin biosynthetic gene cluster of Streptomyces spheroides
Classification ISOMERASE
Compound NOVW
Source Streptomyces niveus (Streptomyces spheroides) (Q9L9E5_STRSH)
Sequence A:  SGLVPRGSHMRLRPLGIEGVWEITPEQRADPRGVFLDWYH
VDRFAEAIGRPLRLAQANLSVSVRGVVRGIHFVDVPPGQA
KYVTCVRGAVFDVVVDLRVGSPTYGCWEGTRLDDVSRRAV
YLSEGIGHGFCAISDEATLCYLSSGTYDPATEHGVHPLDP
ELAIDWPTGTPLLSPRDQDALLLAEARDAGLLPTYATCQ
Description


Functional site

1) chain A
residue 19
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1191
source : AC1

2) chain A
residue 165
type
sequence S
description BINDING SITE FOR RESIDUE SO4 A 1191
source : AC1

3) chain A
residue 167
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 1191
source : AC1

4) chain A
residue -1
type
sequence S
description BINDING SITE FOR RESIDUE EDO A 1192
source : AC2

5) chain A
residue -3
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 1192
source : AC2

6) chain A
residue 15
type
sequence T
description BINDING SITE FOR RESIDUE EDO A 1192
source : AC2

7) chain A
residue 16
type
sequence P
description BINDING SITE FOR RESIDUE EDO A 1192
source : AC2

8) chain A
residue 107
type
sequence S
description BINDING SITE FOR RESIDUE EDO A 1192
source : AC2

9) chain A
residue 109
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 1192
source : AC2

10) chain A
residue 105
type
sequence D
description BINDING SITE FOR RESIDUE EDO A 1193
source : AC3

11) chain A
residue 108
type
sequence R
description BINDING SITE FOR RESIDUE EDO A 1193
source : AC3

12) chain A
residue 5
type
sequence P
description BINDING SITE FOR RESIDUE EDO A 1194
source : AC4

13) chain A
residue 8
type
sequence I
description BINDING SITE FOR RESIDUE EDO A 1194
source : AC4

14) chain A
residue 9
type
sequence E
description BINDING SITE FOR RESIDUE EDO A 1194
source : AC4

15) chain A
residue 10
type
sequence G
description BINDING SITE FOR RESIDUE EDO A 1194
source : AC4

16) chain A
residue 11
type
sequence V
description BINDING SITE FOR RESIDUE EDO A 1194
source : AC4

17) chain A
residue 12
type
sequence W
description BINDING SITE FOR RESIDUE EDO A 1194
source : AC4

18) chain A
residue 23
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:Q9HU21
source Swiss-Prot : SWS_FT_FI3

19) chain A
residue 28
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:Q9HU21
source Swiss-Prot : SWS_FT_FI3

20) chain A
residue 47
type BINDING
sequence Q
description BINDING => ECO:0000250|UniProtKB:Q9HU21
source Swiss-Prot : SWS_FT_FI3

21) chain A
residue 59
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:Q9HU21
source Swiss-Prot : SWS_FT_FI3

22) chain A
residue 72
type BINDING
sequence K
description BINDING => ECO:0000250|UniProtKB:Q9HU21
source Swiss-Prot : SWS_FT_FI3

23) chain A
residue 119
type BINDING
sequence H
description BINDING => ECO:0000250|UniProtKB:Q9HU21
source Swiss-Prot : SWS_FT_FI3

24) chain A
residue 143
type BINDING
sequence E
description BINDING => ECO:0000250|UniProtKB:Q9HU21
source Swiss-Prot : SWS_FT_FI3

25) chain A
residue 167
type BINDING
sequence R
description BINDING => ECO:0000250|UniProtKB:Q9HU21
source Swiss-Prot : SWS_FT_FI3

26) chain A
residue 62
type ACT_SITE
sequence H
description Proton acceptor => ECO:0000250|UniProtKB:Q9HU21
source Swiss-Prot : SWS_FT_FI1

27) chain A
residue 132
type ACT_SITE
sequence Y
description Proton donor => ECO:0000250|UniProtKB:Q9HU21
source Swiss-Prot : SWS_FT_FI2

28) chain A
residue 138
type SITE
sequence Y
description Participates in a stacking interaction with the thymidine ring of dTDP-4-oxo-6-deoxyglucose => ECO:0000250|UniProtKB:Q5SFD1
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links