eF-site ID 2c0b-LR
PDB Code 2c0b
Chain L, R

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Title Catalytic domain of E. coli RNase E in complex with 13-mer RNA
Classification HYDROLASE
Compound RIBONUCLEASE E
Source (2C0B)
Sequence L:  AHIEGRHMKRMLINATQQEELRVALVDGQRLYDLDIESPE
QKKANIYKGKITRIEAAFVDYGAERHGFLPLKEIAREYFP
RPNIKDVLREGQEVIVQIDKEERGNKGAALTTFISLAGSY
LVLMPNNPRAGGISRRIELKEALASLELPLIVRTAGVGKS
AEALQWDLSFRLKHWEAIKKAAESRPAPFLIHQESNVIVR
AFRDYLRQDIGEILIDNPKVLELARQHIAALGRPDFSSKI
KLYTGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDST
EALTAIDINSARDIEETAFNTNLEAADEIARQLRLRDLGG
LIVIDFIDMTPVRHQRAVENRLREAVRQDRARIQISHISR
FGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSL
SILRLIEEEALKENTQEVHAIVPVPIASYLLNEKRSAVNA
IETRQDGVRCVIVPNDQMETPHYHVLRVRKGEETPTLSYM
LPKLHEEA
R:  UUUACAGUAUU
Description


Functional site

1) chain L
residue 303
type
sequence D
description BINDING SITE FOR RESIDUE MG L 1510
source : AC1

2) chain L
residue 346
type
sequence D
description BINDING SITE FOR RESIDUE MG L 1510
source : AC1

3) chain L
residue 404
type
sequence C
description BINDING SITE FOR RESIDUE ZN L 1511
source : AC2

4) chain L
residue 404
type
sequence C
description BINDING SITE FOR RESIDUE ZN L 1511
source : AC2

5) chain L
residue 407
type
sequence C
description BINDING SITE FOR RESIDUE ZN L 1511
source : AC2

6) chain L
residue 407
type
sequence C
description BINDING SITE FOR RESIDUE ZN L 1511
source : AC2

7) chain L
residue 295
type
sequence S
description BINDING SITE FOR RESIDUE MG L 1512
source : AC3

8) chain L
residue 303
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:16237448
source Swiss-Prot : SWS_FT_FI1

9) chain L
residue 346
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:16237448
source Swiss-Prot : SWS_FT_FI1

10) chain L
residue 404
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
source Swiss-Prot : SWS_FT_FI2

11) chain L
residue 407
type BINDING
sequence C
description BINDING => ECO:0000269|PubMed:15779893, ECO:0000269|PubMed:18682225
source Swiss-Prot : SWS_FT_FI2


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