eF-site ID 2bpm-A
PDB Code 2bpm
Chain A

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Title STRUCTURE OF CDK2-CYCLIN A WITH PHA-630529
Classification TRANSFERASE
Compound CELL DIVISION PROTEIN KINASE 2
Source (CCNA2_HUMAN)
Sequence A:  PLVDMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR
LDTETEGVPSTAIREISLLKELNHPNIVKLLDVIHTENKL
YLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLA
FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPV
RTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEM
VTRRALFPGDSEIDQLFRIFRTLGTPDEVVWPGVTSMPDY
KPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRIS
AKAALAHPFFQDVTKPVPHLRL
Description (1)  CELL DIVISION PROTEIN KINASE 2 (E.C.2.7.1.37), CYCLIN A2


Functional site

1) chain A
residue 256
type
ligand
sequence D
description BINDING SITE FOR RESIDUE SO4 A1300
source : AC1

2) chain A
residue 257
type
ligand
sequence E
description BINDING SITE FOR RESIDUE SO4 A1300
source : AC1

3) chain A
residue 260
type
ligand
sequence R
description BINDING SITE FOR RESIDUE SO4 A1300
source : AC1

4) chain A
residue 8
type
ligand
sequence E
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

5) chain A
residue 10
type
ligand
sequence I
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

6) chain A
residue 31
type
ligand
sequence A
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

7) chain A
residue 80
type
ligand
sequence F
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

8) chain A
residue 81
type
ligand
sequence E
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

9) chain A
residue 82
type
ligand
sequence F
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

10) chain A
residue 83
type
ligand
sequence L
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

11) chain A
residue 84
type
ligand
sequence H
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

12) chain A
residue 85
type
ligand
sequence Q
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

13) chain A
residue 86
type
ligand
sequence D
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

14) chain A
residue 134
type
ligand
sequence L
description BINDING SITE FOR RESIDUE 529 A1299
source : AC3

15) chain A
residue 149
type catalytic
ligand
sequence A
description Mapped from 2phk to 2bpm using BLAST. All catalytic residues present. Original details record follows: a catalytic site defined by CATRES, Medline 98031892
source extCATRES : extCATRES1

16) chain A
residue 151
type catalytic
ligand
sequence A
description Mapped from 2phk to 2bpm using BLAST. All catalytic residues present. Original details record follows: a catalytic site defined by CATRES, Medline 98031892
source extCATRES : extCATRES1

17) chain A
residue 8-10
type binding
ligand 529: (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE
sequence EKI
description (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE binding site
source pdb_hetatom : 529_2bpm_A_1299

18) chain A
residue 18
type binding
ligand 529: (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE
sequence V
description (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE binding site
source pdb_hetatom : 529_2bpm_A_1299

19) chain A
residue 20
type binding
ligand 529: (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE
sequence K
description (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE binding site
source pdb_hetatom : 529_2bpm_A_1299

20) chain A
residue 31
type binding
ligand 529: (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE
sequence A
description (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE binding site
source pdb_hetatom : 529_2bpm_A_1299

21) chain A
residue 33
type binding
ligand 529: (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE
sequence K
description (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE binding site
source pdb_hetatom : 529_2bpm_A_1299

22) chain A
residue 64
type binding
ligand 529: (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE
sequence V
description (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE binding site
source pdb_hetatom : 529_2bpm_A_1299

23) chain A
residue 80-86
type binding
ligand 529: (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE
sequence FEFLHQD
description (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE binding site
source pdb_hetatom : 529_2bpm_A_1299

24) chain A
residue 89
type binding
ligand 529: (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE
sequence K
description (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE binding site
source pdb_hetatom : 529_2bpm_A_1299

25) chain A
residue 134
type binding
ligand 529: (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE
sequence L
description (2S)-N-[(3Z)-5-CYCLOPROPYL-3H-PYRAZOL-3-YLIDENE]-2-[4-(2-OXOIMIDAZOLIDIN-1-YL)PHENYL]PROPANAMIDE binding site
source pdb_hetatom : 529_2bpm_A_1299

26) chain A
residue 131
type catalytic
ligand
sequence Q
description Annotated By Reference To The Literature 1ir3
source CSA : CSA1

27) chain A
residue 127
type catalytic
ligand
sequence D
description Annotated By Reference To The Literature 1ir3
source CSA : CSA1

28) chain A
residue 127
type catalytic
ligand
sequence D
description Annotated By Reference To The Literature 1ir3
source CSA : CSA3

29) chain A
residue 129
type catalytic
ligand
sequence K
description Annotated By Reference To The Literature 1ir3
source CSA : CSA3

30) chain A
residue 127
type catalytic
ligand
sequence D
description Annotated By Reference To The Literature 1ir3
source CSA : CSA5

31) chain A
residue 129
type catalytic
ligand
sequence K
description Annotated By Reference To The Literature 1ir3
source CSA : CSA5

32) chain A
residue 165
type catalytic
ligand
sequence T
description Annotated By Reference To The Literature 1ir3
source CSA : CSA5

33) chain A
residue 127
type catalytic
ligand
sequence D
description Annotated By Reference To The Literature 1ir3
source CSA : CSA7

34) chain A
residue 129
type catalytic
ligand
sequence K
description Annotated By Reference To The Literature 1ir3
source CSA : CSA7

35) chain A
residue 132
type catalytic
ligand
sequence N
description Annotated By Reference To The Literature 1ir3
source CSA : CSA7


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