eF-site ID 2b8p-A PDB Code 2b8p Chain A click to enlarge Title Crystal structure of Acanthamoeba polyphaga mimivirus NDK, the first viral nucleoside diphosphate kinase Classification TRANSFERASE Compound Probable nucleoside diphosphate kinase Source null (NDK_MIMIV) Sequence A:  YKKAGLQRTLVLIKPDAFERSLVAEIMGRIEKKNFKIVSM KFWSKAPRNLIEQHYKEYFNDNCDFMVSGPIISIVYEGTD AISKIRRLQGNILTPGTIRGDLANDIRENLIHASDSEDSA VDEISIWFP Description Functional site 1) chain A residue 9 type sequence K description BINDING SITE FOR RESIDUE SO4 A 5000 source : AC1 2) chain A residue 50 type sequence Y description BINDING SITE FOR RESIDUE SO4 A 5000 source : AC1 3) chain A residue 86 type sequence R description BINDING SITE FOR RESIDUE SO4 A 5000 source : AC1 4) chain A residue 99 type sequence R description BINDING SITE FOR RESIDUE SO4 A 5000 source : AC1 5) chain A residue 109 type sequence N description BINDING SITE FOR RESIDUE SO4 A 5000 source : AC1 6) chain A residue 112 type sequence H description BINDING SITE FOR RESIDUE SO4 A 5000 source : AC1 7) chain A residue 91 type sequence N description BINDING SITE FOR RESIDUE SO4 A 5002 source : AC3 8) chain A residue 92 type sequence I description BINDING SITE FOR RESIDUE SO4 A 5002 source : AC3 9) chain A residue 99 type sequence R description BINDING SITE FOR RESIDUE SO4 A 5002 source : AC3 10) chain A residue 106 type sequence I description BINDING SITE FOR RESIDUE SO4 A 5002 source : AC3 11) chain A residue 107 type sequence R description BINDING SITE FOR RESIDUE SO4 B 5003 source : AC4 12) chain A residue 109-117 type prosite sequence NLIHASDSE description NDPK Nucleoside diphosphate kinase (NDPK) active site signature. NliHASDSE source prosite : PS00469 13) chain A residue 112 type ACT_SITE sequence H description Pros-phosphohistidine intermediate => ECO:0000255|PROSITE-ProRule:PRU10030 source Swiss-Prot : SWS_FT_FI1 14) chain A residue 9 type BINDING sequence K description source Swiss-Prot : SWS_FT_FI2 15) chain A residue 58 type BINDING sequence Y description source Swiss-Prot : SWS_FT_FI2 16) chain A residue 86 type BINDING sequence R description source Swiss-Prot : SWS_FT_FI2 17) chain A residue 99 type BINDING sequence R description source Swiss-Prot : SWS_FT_FI2 18) chain A residue 109 type BINDING sequence N description source Swiss-Prot : SWS_FT_FI2

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