|
eF-site ID
|
2b8k-J |
PDB Code
|
2b8k |
Chain
|
J |
|
click to enlarge
|
|
Title
|
12-subunit RNA Polymerase II |
Classification
|
TRANSFERASE |
Compound
|
DNA-directed RNA polymerase II largest subunit |
Source
|
ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; |
|
Sequence
|
J: |
MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLG
LKRYCCRRMILTHVDLIEKFLRYNP
|
|
Description
|
(1) |
DNA-directed RNA polymerase II largest subunit (E.C.2.7.7.6), DNA-directed RNA polymerase II 140 kDa polypeptide (E.C.2.7.7.6), DNA-directed RNA polymerase II 45 kDa polypeptide (E.C.2.7.7.6), DNA-directed RNA polymerase II 32 kDa polypeptide (E.C.2.7.7.6), DNA-directed RNA polymerases I, II, and III 27 kDa polypeptide (E.C.2.7.7.6), DNA-directed RNA polymerases I, II, and III 23 kDa polypeptide (E.C.2.7.7.6), DNA-directed RNA polymerase II 19 kDa polypeptide (E.C.2.7.7.6), DNA-directed RNA polymerases I, II, and III 14.5 kDa polypeptide (E.C.2.7.7.6), DNA-directed RNA polymerase II subunit 9 (E.C.2.7.7.6), DNA-directed RNA polymerases I/II/III subunit 10 (E.C.2.7.7.6), DNA-directed RNA polymerase II 13.6 kDa polypeptide (E.C.2.7.7.6), DNA-directed RNA polymerases I, II, and III 7.7 kDa polypeptide (E.C.2.7.7.6)
|
|
Functional site
|
|
1)
|
chain |
J |
residue |
7 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN J 71
|
source |
: AC7
|
|
2)
|
chain |
J |
residue |
10 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN J 71
|
source |
: AC7
|
|
3)
|
chain |
J |
residue |
45 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN J 71
|
source |
: AC7
|
|
4)
|
chain |
J |
residue |
46 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN J 71
|
source |
: AC7
|
|
5)
|
chain |
J |
residue |
10 |
type |
ZN_FING |
sequence |
C
|
description |
C4-type
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
6)
|
chain |
J |
residue |
45 |
type |
ZN_FING |
sequence |
C
|
description |
C4-type
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
7)
|
chain |
J |
residue |
46 |
type |
ZN_FING |
sequence |
C
|
description |
C4-type
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
8)
|
chain |
J |
residue |
2-11 |
type |
prosite |
sequence |
IVPVRCFSCG
|
description |
RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG
|
source |
prosite : PS01112
|
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|
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