eF-site ID 2b63-A
PDB Code 2b63
Chain A

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Title Complete RNA Polymerase II-RNA inhibitor complex
Classification TRANsferase/RNA
Compound 31-MER
Source ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae;
Sequence A:  VGQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETM
DETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHF
GHIDLAKPVFHVGFIAKIKKVCECVCMHCGKLLLDEHNEL
MRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQL
VSRGGCGNTQPTIRKDGLKLVGSWKDEPELRVLSTEEILN
IFKHISVKDFTSLGFNEVFSRPEWMILTCLPVPPPPVRPS
ISFNESQRGEDDLTFKLADILKANISLETLEHNGAPHHAI
EEAESLLQFHVATYMDNDIAGQPQALQKSGRPVKSIRARL
KGKEGRIRGNLMGKRVDFSARTVISGDPNLELDQVGVPKS
IAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIRDS
GDRIDLRYSKRAGDIQLQYGWKVERHIMDNDPVLFNRQPS
LHKMSMMAHRVKVIPYSTFRLNLSVTSPYNADFDGDEMNL
HVPQSEETRAELSQLCAVPLQIVSPQSNKPCMGIVQDTLC
GIRKLTLRDTFIELDQVLNMLYWVPDWDGVIPTPAIIKPK
PLWSGKQILSVAIPNGIHLQRFDEGTTLLSPKDNGMLIID
GQIIFGVVEKKTVGSSNGGLIHVVTREKGPQVCAKLFGNI
QKVVNFWLLHNGFSTGIGDTIADGPTMREITETIAEAKKK
VLDVTKEAQANLLTAKHGMTLRESFEDNVVRFLNEARDKA
GRLAEVNLKDLNNVKQMVMAGSKGSFINIAQMSACVGQQS
VEGKRIAFGFVDRTLPHFSKDDYSPESKGFVENSYLRGLT
PQEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIM
VHYDNTTRNSLGNVIQFIYGEDGMDAAHIEKQSLDTIGGS
DAAFEKRYRVDLLNTDHTLDPSLLESGSEILGDLKLQVLL
DEEYKQLVKDRKFLREVFVDGEANWPLPVNIRRIIQNAQQ
TFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKNEIIQN
AQRDAVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNI
EAQFLRSVVHPGEMVGVLAAQSIGEPATQMTLKKVTSGVP
RLKEILNVAKNMKTPSLTVYLEPGHAADQEQAKLIRSAIE
HTTLKSVTIASEIYYDPDPRSTVIPEDEEIIQLHFSLQQS
PWLLRLELDRAAMNDKDLTMGQVGERIKQTFKNDLFVIWS
EDNDEKLIIRCRVVAEEDHMLKKIENTMLENITLRGVENI
ERVVMMKYDRKVPSPTGEYVKEPEWVLETDGVNLSEVMTV
PGIDPTRIYTNSFIDIMEVLGIEAGRAALYKEVYNVIASD
GSYVNYRHMALLVDVMTTQGGLTSVTRHGFNRSNTGALMR
CSFEETVEILFEAGASAELDDCRGVSENVILGQMAPIGTG
AFDVMIDEESLVKYMP
Description


Functional site

1) chain A
residue 108
type
sequence M
description BINDING SITE FOR RESIDUE ZN A 2456
source : AC1

2) chain A
residue 110
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2456
source : AC1

3) chain A
residue 148
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2456
source : AC1

4) chain A
residue 167
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2456
source : AC1

5) chain A
residue 67
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2457
source : AC2

6) chain A
residue 70
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2457
source : AC2

7) chain A
residue 77
type
sequence C
description BINDING SITE FOR RESIDUE ZN A 2457
source : AC2

8) chain A
residue 80
type
sequence H
description BINDING SITE FOR RESIDUE ZN A 2457
source : AC2

9) chain A
residue 481
type
sequence D
description BINDING SITE FOR RESIDUE MG A 2458
source : AC3

10) chain A
residue 483
type
sequence D
description BINDING SITE FOR RESIDUE MG A 2458
source : AC3

11) chain A
residue 485
type
sequence D
description BINDING SITE FOR RESIDUE MG A 2458
source : AC3

12) chain A
residue 483
type ZN_FING
sequence D
description C4-type
source Swiss-Prot : SWS_FT_FI1

13) chain A
residue 485
type ZN_FING
sequence D
description C4-type
source Swiss-Prot : SWS_FT_FI1

14) chain A
residue 107
type ZN_FING
sequence C
description C4-type
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 110
type ZN_FING
sequence C
description C4-type
source Swiss-Prot : SWS_FT_FI1

16) chain A
residue 148
type ZN_FING
sequence C
description C4-type
source Swiss-Prot : SWS_FT_FI1

17) chain A
residue 167
type ZN_FING
sequence C
description C4-type
source Swiss-Prot : SWS_FT_FI1

18) chain A
residue 481
type ZN_FING
sequence D
description C4-type
source Swiss-Prot : SWS_FT_FI1

19) chain A
residue 483
type catalytic
sequence D
description 788
source MCSA : MCSA1

20) chain A
residue 485
type catalytic
sequence D
description 788
source MCSA : MCSA1

21) chain A
residue 1350
type MOD_RES
sequence K
description Phosphoserine => ECO:0007744|PubMed:17330950, ECO:0007744|PubMed:18407956
source Swiss-Prot : SWS_FT_FI3


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