eF-site ID 2b5u-ABCD
PDB Code 2b5u
Chain A, B, C, D

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Title Crystal Structure Of Colicin E3 V206C Mutant In Complex With Its Immunity Protein
Classification RIBOSOME INHIBITOR, HYDROLASE
Compound Colicin E3
Source Escherichia coli (IMM3_ECOLI)
Sequence A:  SAVAAPVAFGFPALSTPGAGGLAVSISAGALSAAIADIMA
ALKGPFKFGLWGVALYGVLPSQIAKDDPNMMSKIVTSLPA
DDITESPVSSLPLDKATVNVNVRVVDDVKDERQNISVVSG
VPMSCPVVDAKPTERPGVFTASIPGAPVLNISVNNSTPAV
QTLSPGVTNNTDKDVRPAGFTQGGNTRDAVIRFPKDSGHN
AVYVSVSDVLSPDQVKQRQDEENRRQQEWDATHPVEAAER
NYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAA
NKTLADAIAEIKQFNRFAHDPMAGGHRMWQMAGLKAQRAQ
TDVNNKQAAFDAAAKEKSDADAALSSAMESRKKKEDKKRS
AENNLNDEKNKPRKGFKDYGHDYHPAPKTENIKGLGDLKP
GIPKTPKQNGGGKRKRWTGDKGRKIYEWDSQHGELEGYRA
SDGQHLGSFDPKTGNQLKGPDPKRNIKKYL
B:  GLKLDLTWFDKSTEDFKGEEYSKDFGDDGSVMESLGVPFK
DNVNNGCFDVIAEWVPLLQPYFNHQIDISDNEYFVSFDYR
DGDW
C:  SAVAAPVAFGFPALSTPGAGGLAVSISAGALSAAIADIMA
ALKGPFKFGLWGVALYGVLPSQIAKDDPNMMSKIVTSLPA
DDITESPVSSLPLDKATVNVNVRVVDDVKDERQNISVVSG
VPMSCPVVDAKPTERPGVFTASIPGAPVLNISVNNSTPAV
QTLSPGVTNNTDKDVRPAGFTQGGNTRDAVIRFPKDSGHN
AVYVSVSDVLSPDQVKQRQDEENRRQQEWDATHPVEAAER
NYERARAELNQANEDVARNQERQAKAVQVYNSRKSELDAA
NKTLADAIAEIKQFNRFAHDPMAGGHRMWQMAGLKAQRAQ
TDVNNKQAAFDAAAKEKSDADAALSSAMESRKKKEDKKRS
AENNLNDEKNKPRKGFKDYGHDYHPAPKTENIKGLGDLKP
GIPKTPKQNGGGKRKRWTGDKGRKIYEWDSQHGELEGYRA
SDGQHLGSFDPKTGNQLKGPDPKRNIKKYL
D:  GLKLDLTWFDKSTEDFKGEEYSKDFGDDGSVMESLGVPFK
DNVNNGCFDVIAEWVPLLQPYFNHQIDISDNEYFVSFDYR
DGDW
Description


Functional site

1) chain C
residue 495
type
sequence R
description BINDING SITE FOR RESIDUE CIT C 601
source : AC1

2) chain C
residue 519
type
sequence Y
description BINDING SITE FOR RESIDUE CIT C 601
source : AC1

3) chain C
residue 544
type
sequence K
description BINDING SITE FOR RESIDUE CIT C 601
source : AC1

4) chain C
residue 545
type
sequence R
description BINDING SITE FOR RESIDUE CIT C 601
source : AC1

5) chain C
residue 546
type
sequence N
description BINDING SITE FOR RESIDUE CIT C 601
source : AC1

6) chain A
residue 495
type
sequence R
description BINDING SITE FOR RESIDUE CIT A 602
source : AC2

7) chain A
residue 519
type
sequence Y
description BINDING SITE FOR RESIDUE CIT A 602
source : AC2

8) chain A
residue 545
type
sequence R
description BINDING SITE FOR RESIDUE CIT A 602
source : AC2

9) chain A
residue 546
type
sequence N
description BINDING SITE FOR RESIDUE CIT A 602
source : AC2

10) chain A
residue 550
type
sequence Y
description BINDING SITE FOR RESIDUE CIT A 602
source : AC2

11) chain A
residue 510
type catalytic
sequence D
description 530
source MCSA : MCSA1

12) chain A
residue 513
type catalytic
sequence H
description 530
source MCSA : MCSA1

13) chain A
residue 517
type catalytic
sequence E
description 530
source MCSA : MCSA1

14) chain A
residue 545
type catalytic
sequence R
description 530
source MCSA : MCSA1

15) chain C
residue 510
type catalytic
sequence D
description 530
source MCSA : MCSA2

16) chain C
residue 513
type catalytic
sequence H
description 530
source MCSA : MCSA2

17) chain C
residue 517
type catalytic
sequence E
description 530
source MCSA : MCSA2

18) chain C
residue 545
type catalytic
sequence R
description 530
source MCSA : MCSA2

19) chain A
residue 513
type ACT_SITE
sequence H
description Proton donor => ECO:0000305|PubMed:11741540, ECO:0000305|PubMed:20852642
source Swiss-Prot : SWS_FT_FI1

20) chain C
residue 513
type ACT_SITE
sequence H
description Proton donor => ECO:0000305|PubMed:11741540, ECO:0000305|PubMed:20852642
source Swiss-Prot : SWS_FT_FI1

21) chain A
residue 517
type ACT_SITE
sequence E
description Proton acceptor => ECO:0000305|PubMed:11741540, ECO:0000305|PubMed:20852642
source Swiss-Prot : SWS_FT_FI2

22) chain C
residue 517
type ACT_SITE
sequence E
description Proton acceptor => ECO:0000305|PubMed:11741540, ECO:0000305|PubMed:20852642
source Swiss-Prot : SWS_FT_FI2

23) chain A
residue 545
type ACT_SITE
sequence R
description ACT_SITE => ECO:0000305|PubMed:11741540
source Swiss-Prot : SWS_FT_FI3

24) chain C
residue 545
type ACT_SITE
sequence R
description ACT_SITE => ECO:0000305|PubMed:11741540
source Swiss-Prot : SWS_FT_FI3

25) chain A
residue 510
type SITE
sequence D
description Stabilizes positive charge on His-513 => ECO:0000305|PubMed:20852642
source Swiss-Prot : SWS_FT_FI4

26) chain C
residue 510
type SITE
sequence D
description Stabilizes positive charge on His-513 => ECO:0000305|PubMed:20852642
source Swiss-Prot : SWS_FT_FI4


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