eF-site ID 2b4j-B
PDB Code 2b4j
Chain B

click to enlarge
Title Structural basis for the recognition between HIV-1 integrase and LEDGF/p75
Classification viral protein, recombination
Compound Integrase (IN)
Source Human immunodeficiency virus type 1 group M subtype B (isolate NY5) (HIV-1) (PSIP1_HUMAN)
Sequence B:  SPGIWQLDCTHLEGKVILVAVHVASGYIEAEVIPAETGQE
TAYFLLKLAGRWPVKTVHTDNGSNFTSTTVKAACWWAGIK
QEFGIPYNPQSQGVIESMNKELKKIIGQVRDQAEHLKTAV
QMAVFIHNKKRSAGERIVDIIATDI
Description


Functional site

1) chain B
residue 66
type
sequence T
description BINDING SITE FOR RESIDUE PO4 B 302
source : AC2

2) chain B
residue 67
type
sequence H
description BINDING SITE FOR RESIDUE PO4 B 302
source : AC2

3) chain B
residue 159
type
sequence K
description BINDING SITE FOR RESIDUE PO4 B 302
source : AC2

4) chain B
residue 71
type
sequence K
description BINDING SITE FOR RESIDUE GOL B 403
source : AC5

5) chain B
residue 71
type
sequence K
description BINDING SITE FOR RESIDUE GOL B 403
source : AC5

6) chain B
residue 171
type
sequence H
description BINDING SITE FOR RESIDUE GOL B 403
source : AC5

7) chain B
residue 172
type
sequence L
description BINDING SITE FOR RESIDUE GOL B 403
source : AC5

8) chain B
residue 57
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI1

9) chain B
residue 58
type MOD_RES
sequence P
description Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:20068231, ECO:0007744|PubMed:23186163
source Swiss-Prot : SWS_FT_FI1


Display surface

Download
Links