eF-site ID 2aqv-B
PDB Code 2aqv
Chain B

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Title Crystal Structure of E. coli Isoaspartyl Dipeptidase mutant Y137F
Classification HYDROLASE
Compound Isoaspartyl dipeptidase
Source Escherichia coli (strain K12) (IADA_ECOLI)
Sequence B:  MIDYTAAGFTLLQGAHLYAPEDRGICDVLVANGKIIAVAS
NIPSDIVPNCTVVDLSGQILCPGFIDQHVHLIGGGGEAGP
TTRTPEVALSRLTEAGVTSVVGLLGTDSISRHPESLLAKT
RALNEEGISAWMLTGAFHVPSRTITGSVEKDVAIIDRVIG
VXCAISDHRSAAPDVYHLANMAAESRVGGLLGGKPGVTVF
HMGDSKKALQPIYDLLENCDVPISKLLPTHVNRNVPLFEQ
ALEFARKGGTIDITSSIDEPVAPAEGIARAVQAGIPLARV
TLSSDGNGSVAGFETLLETVQVLVKDYDFSISDALRPLTS
SVAGFLNLTGKGEILPGNDADLLVMTPELRIEQVYARGKL
MVKDGKACVKGTFET
Description


Functional site

1) chain B
residue 68
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 803
source : AC3

2) chain B
residue 70
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 803
source : AC3

3) chain B
residue 162
type
sequence X
description BINDING SITE FOR RESIDUE ZN B 803
source : AC3

4) chain B
residue 285
type
sequence D
description BINDING SITE FOR RESIDUE ZN B 803
source : AC3

5) chain B
residue 162
type
sequence X
description BINDING SITE FOR RESIDUE ZN B 804
source : AC4

6) chain B
residue 201
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 804
source : AC4

7) chain B
residue 230
type
sequence H
description BINDING SITE FOR RESIDUE ZN B 804
source : AC4

8) chain B
residue 68
type catalytic
sequence H
description 172
source MCSA : MCSA2

9) chain B
residue 70
type catalytic
sequence H
description 172
source MCSA : MCSA2

10) chain B
residue 162
type catalytic
sequence X
description 172
source MCSA : MCSA2

11) chain B
residue 201
type catalytic
sequence H
description 172
source MCSA : MCSA2

12) chain B
residue 230
type catalytic
sequence H
description 172
source MCSA : MCSA2

13) chain B
residue 285
type catalytic
sequence D
description 172
source MCSA : MCSA2

14) chain B
residue 285
type ACT_SITE
sequence D
description Proton acceptor => ECO:0000269|PubMed:12946361
source Swiss-Prot : SWS_FT_FI1

15) chain B
residue 285
type BINDING
sequence D
description BINDING => ECO:0000269|PubMed:12718528, ECO:0000269|PubMed:12946361, ECO:0000269|PubMed:15882050, ECO:0000269|PubMed:16289685
source Swiss-Prot : SWS_FT_FI2

16) chain B
residue 68
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12718528, ECO:0000269|PubMed:12946361, ECO:0000269|PubMed:15882050, ECO:0000269|PubMed:16289685
source Swiss-Prot : SWS_FT_FI2

17) chain B
residue 70
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12718528, ECO:0000269|PubMed:12946361, ECO:0000269|PubMed:15882050, ECO:0000269|PubMed:16289685
source Swiss-Prot : SWS_FT_FI2

18) chain B
residue 201
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12718528, ECO:0000269|PubMed:12946361, ECO:0000269|PubMed:15882050, ECO:0000269|PubMed:16289685
source Swiss-Prot : SWS_FT_FI2

19) chain B
residue 230
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:12718528, ECO:0000269|PubMed:12946361, ECO:0000269|PubMed:15882050, ECO:0000269|PubMed:16289685
source Swiss-Prot : SWS_FT_FI2

20) chain B
residue 75
type BINDING
sequence G
description
source Swiss-Prot : SWS_FT_FI3

21) chain B
residue 289
type BINDING
sequence S
description BINDING => ECO:0000305|PubMed:12718528, ECO:0000305|PubMed:12946361, ECO:0000305|PubMed:15882050
source Swiss-Prot : SWS_FT_FI4

22) chain B
residue 106
type BINDING
sequence T
description BINDING => ECO:0000305|PubMed:12718528, ECO:0000305|PubMed:12946361, ECO:0000305|PubMed:15882050
source Swiss-Prot : SWS_FT_FI4

23) chain B
residue 137
type BINDING
sequence F
description BINDING => ECO:0000305|PubMed:12718528, ECO:0000305|PubMed:12946361, ECO:0000305|PubMed:15882050
source Swiss-Prot : SWS_FT_FI4

24) chain B
residue 169
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:12718528, ECO:0000305|PubMed:12946361, ECO:0000305|PubMed:15882050
source Swiss-Prot : SWS_FT_FI4

25) chain B
residue 233
type BINDING
sequence R
description BINDING => ECO:0000305|PubMed:12718528, ECO:0000305|PubMed:12946361, ECO:0000305|PubMed:15882050
source Swiss-Prot : SWS_FT_FI4

26) chain B
residue 162
type BINDING
sequence X
description via carbamate group => ECO:0000269|PubMed:12718528, ECO:0000269|PubMed:12946361, ECO:0000269|PubMed:15882050, ECO:0000269|PubMed:16289685
source Swiss-Prot : SWS_FT_FI5

27) chain B
residue 162
type MOD_RES
sequence X
description N6-carboxylysine => ECO:0000269|PubMed:12718528, ECO:0000269|PubMed:12946361, ECO:0000269|PubMed:15882050, ECO:0000269|PubMed:16289685
source Swiss-Prot : SWS_FT_FI6


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