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eF-site ID
|
1zla-D |
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PDB Code
|
1zla |
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Chain
|
D |
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click to enlarge
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Title
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X-ray Structure of a Kaposi's sarcoma herpesvirus LANA peptide bound to the nucleosomal core |
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Classification
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STRUCTURAL PROTEIN/DNA |
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Compound
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Palindromic 146bp Human alpha-Satellite DNA fragment |
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Source
|
(1ZLA) |
|
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Sequence
|
D: |
RKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFER
IAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVS
EGTKAVTKYTSAK
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Description
|
|
Functional site
|
|
|
1)
|
chain |
D |
| residue |
1289-1311 |
| type |
prosite |
| sequence |
REIQTAVRLLLPGELAKHAVSEG
|
| description |
HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
|
| source |
prosite : PS00357
|
|
|
2)
|
chain |
D |
| residue |
1309 |
| type |
CARBOHYD |
| sequence |
S
|
| description |
O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
|
| source |
Swiss-Prot : SWS_FT_FI3
|
|
|
3)
|
chain |
D |
| residue |
1317 |
| type |
CROSSLNK |
| sequence |
K
|
| description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0C1H4
|
| source |
Swiss-Prot : SWS_FT_FI4
|
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