|
eF-site ID
|
1zla-D |
PDB Code
|
1zla |
Chain
|
D |
|
click to enlarge
|
|
Title
|
X-ray Structure of a Kaposi's sarcoma herpesvirus LANA peptide bound to the nucleosomal core |
Classification
|
STRUCTURAL PROTEIN/DNA |
Compound
|
Palindromic 146bp Human alpha-Satellite DNA fragment |
Source
|
(1ZLA) |
|
Sequence
|
D: |
RKESYAIYVYKVLKQVHPDTGISSKAMSIMNSFVNDVFER
IAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVS
EGTKAVTKYTSAK
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
D |
residue |
1289-1311 |
type |
prosite |
sequence |
REIQTAVRLLLPGELAKHAVSEG
|
description |
HISTONE_H2B Histone H2B signature. REIQTavRlLLpGELaKHAVSEG
|
source |
prosite : PS00357
|
|
2)
|
chain |
D |
residue |
1309 |
type |
CARBOHYD |
sequence |
S
|
description |
O-linked (GlcNAc) serine => ECO:0000250|UniProtKB:P62807
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
3)
|
chain |
D |
residue |
1317 |
type |
CROSSLNK |
sequence |
K
|
description |
Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0C1H4
|
source |
Swiss-Prot : SWS_FT_FI4
|
|
|
|