eF-site ID 1zg5-ABCD
PDB Code 1zg5
Chain A, B, C, D

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Title NarL complexed to narG-89 promoter palindromic tail-to-tail DNA site
Classification TRANSCRIPTION/DNA
Compound 5'-D(*CP*GP*TP*AP*CP*CP*CP*CP*TP*AP*TP*AP*GP*GP*GP*GP*TP*AP*CP*G)-3'
Source Escherichia coli (strain K12) (1ZG5)
Sequence A:  RDVNQLTPRERDILKLIAQGLPNKXIARRLDITESTVKVH
VKHXLKKXKLKSRVEAAVWVHQERIF
B:  RDVNQLTPRERDILKLIAQGLPNKXIARRLDITESTVKVH
VKHXLKKXKLKSRVEAAVWVHQERIF
C:  CGTACCCCTATAGGGGTACG
D:  CGTACCCCTATAGGGGTACG
Description


Functional site

1) chain A
residue 161
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 302
source : AC2

2) chain B
residue 158
type
sequence P
description BINDING SITE FOR RESIDUE SO4 B 303
source : AC3

3) chain B
residue 161
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 303
source : AC3

4) chain A
residue 185
type
sequence S
description BINDING SITE FOR RESIDUE SO4 A 305
source : AC5

5) chain A
residue 188
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 305
source : AC5

6) chain D
residue 25
type
sequence C
description BINDING SITE FOR RESIDUE SO4 A 305
source : AC5

7) chain D
residue 26
type
sequence C
description BINDING SITE FOR RESIDUE SO4 A 305
source : AC5

8) chain B
residue 185
type
sequence S
description BINDING SITE FOR RESIDUE SO4 B 306
source : AC6

9) chain B
residue 188
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 306
source : AC6

10) chain C
residue 6
type
sequence C
description BINDING SITE FOR RESIDUE SO4 B 306
source : AC6

11) chain A
residue 178
type
sequence R
description BINDING SITE FOR RESIDUE SO4 A 309
source : AC9

12) chain B
residue 178
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 310
source : BC1

13) chain A
residue 173-192
type DNA_BIND
sequence NKXIARRLDITESTVKVHVK
description H-T-H motif => ECO:0000255|PROSITE-ProRule:PRU00411
source Swiss-Prot : SWS_FT_FI1

14) chain B
residue 173-192
type DNA_BIND
sequence NKXIARRLDITESTVKVHVK
description H-T-H motif => ECO:0000255|PROSITE-ProRule:PRU00411
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 170-197
type prosite
sequence GLPNKXIARRLDITESTVKVHVKHXLKK
description HTH_LUXR_1 LuxR-type HTH domain signature. GlpNkmIArrLdItesTVkvHvkHMlkK
source prosite : PS00622


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