eF-site ID 1zcd-B
PDB Code 1zcd
Chain B

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Title Crystal structure of the Na+/H+ antiporter NhaA
Classification MEMBRANE PROTEIN
Compound Na(+)/H(+) antiporter 1
Source null (NHAA_ECOLI)
Sequence B:  SSDASGGIILIIAAILAMIMANSGATSGWYHDFLETPVQL
RVGSLEINKNMLLWINDALMAVFFLLVGLEVKRELMQGSL
ASLRQAAFPVIAAIGGMIVPALLYLAFNYADPITREGWAI
PAATDIAFALGVLALLGSRVPLALKIFLMALAIIDDLGAI
IIIALFYTNDLSMASLGVAAVAIAVLAVLNLCGARRTGVY
ILVGVVLWTAVLKSGVHATLAGVIVGFFIPLKEKHGRSPA
KRLEHVLHPWVAYLILPLFAFANAGVSLQGVTLDGLTSIL
PLGIIAGLLIGKPLGISLFCWLALRLKLAHLPEGTTYQQI
MVVGILCGIGFTMSIFIASLAFGSVDPELINWAKLGILVG
SISSAVIGYSWLRVRL
Description


Functional site

1) chain B
residue 201-204
type TOPO_DOM
sequence GARR
description Cytoplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI1

2) chain B
residue 237-253
type TOPO_DOM
sequence IPLKEKHGRSPAKRLEH
description Cytoplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI1

3) chain B
residue 311-339
type TOPO_DOM
sequence ALRLKLAHLPEGTTYQQIMVVGILCGIGF
description Cytoplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI1

4) chain B
residue 81-96
type TOPO_DOM
sequence RELMQGSLASLRQAAF
description Cytoplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI1

5) chain B
residue 131-154
type TOPO_DOM
sequence ATDIAFALGVLALLGSRVPLALKI
description Cytoplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI1

6) chain B
residue 163
type SITE
sequence D
description Essential for cation binding and translocation => ECO:0000305|PubMed:15988517, ECO:0000305|PubMed:19274728, ECO:0000305|PubMed:22915592, ECO:0000305|PubMed:25422503, ECO:0000305|PubMed:27021484, ECO:0000305|PubMed:27708266, ECO:0000305|PubMed:30409911, ECO:0000305|PubMed:7737413
source Swiss-Prot : SWS_FT_FI17

7) chain B
residue 164
type SITE
sequence D
description Essential for cation binding and translocation => ECO:0000305|PubMed:15988517, ECO:0000305|PubMed:19274728, ECO:0000305|PubMed:22915592, ECO:0000305|PubMed:25422503, ECO:0000305|PubMed:27021484, ECO:0000305|PubMed:27708266, ECO:0000305|PubMed:7737413
source Swiss-Prot : SWS_FT_FI18

8) chain B
residue 241
type SITE
sequence E
description Important for pH response => ECO:0000305|PubMed:10455127
source Swiss-Prot : SWS_FT_FI19

9) chain B
residue 254
type SITE
sequence V
description Important for pH response => ECO:0000305|PubMed:10455127
source Swiss-Prot : SWS_FT_FI19

10) chain B
residue 252
type SITE
sequence E
description Important for pH response => ECO:0000305|PubMed:14604993
source Swiss-Prot : SWS_FT_FI20

11) chain B
residue 300
type SITE
sequence K
description Important for stability and activity => ECO:0000305|PubMed:15988517, ECO:0000305|PubMed:22915592, ECO:0000305|PubMed:25422503, ECO:0000305|PubMed:27708266, ECO:0000305|PubMed:28330875, ECO:0000305|PubMed:30409911
source Swiss-Prot : SWS_FT_FI21

12) chain B
residue 133
type SITE
sequence D
description Important for stability, cation binding and translocation => ECO:0000305|PubMed:15988517, ECO:0000305|PubMed:22915592, ECO:0000305|PubMed:27021484, ECO:0000305|PubMed:29410365, ECO:0000305|PubMed:7737413
source Swiss-Prot : SWS_FT_FI16

13) chain B
residue 223
type TOPO_DOM
sequence G
description Periplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI3

14) chain B
residue 273-286
type TOPO_DOM
sequence GVSLQGVTLDGLTS
description Periplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI3

15) chain B
residue 351-357
type TOPO_DOM
sequence GSVDPEL
description Periplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI3

16) chain B
residue 32-58
type TOPO_DOM
sequence GATSGWYHDFLETPVQLRVGSLEINKN
description Periplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI3

17) chain B
residue 117-122
type TOPO_DOM
sequence YADPIT
description Periplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI3

18) chain B
residue 177-180
type TOPO_DOM
sequence NDLS
description Periplasmic => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI3

19) chain B
residue 12-31
type TRANSMEM
sequence ASGGIILIIAAILAMIMANS
description Helical; Name=1 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI2

20) chain B
residue 59-80
type TRANSMEM
sequence MLLWINDALMAVFFLLVGLEVK
description Helical; Name=2 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI4

21) chain B
residue 97-116
type TRANSMEM
sequence PVIAAIGGMIVPALLYLAFN
description Helical; Name=3 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI5

22) chain B
residue 123-130
type TRANSMEM
sequence REGWAIPA
description Helical; Name=4 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI6

23) chain B
residue 155-176
type TRANSMEM
sequence FLMALAIIDDLGAIIIIALFYT
description Helical; Name=5 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI7

24) chain B
residue 181-200
type TRANSMEM
sequence MASLGVAAVAIAVLAVLNLC
description Helical; Name=6 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI8

25) chain B
residue 205-222
type TRANSMEM
sequence TGVYILVGVVLWTAVLKS
description Helical; Name=7 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI9

26) chain B
residue 224-236
type TRANSMEM
sequence VHATLAGVIVGFF
description Helical; Name=8 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI10

27) chain B
residue 254-272
type TRANSMEM
sequence VLHPWVAYLILPLFAFANA
description Helical; Name=9 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI11

28) chain B
residue 287-310
type TRANSMEM
sequence ILPLGIIAGLLIGKPLGISLFCWL
description Helical; Name=10 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI12

29) chain B
residue 340-350
type TRANSMEM
sequence TMSIFIASLAF
description Helical; Name=11 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI13

30) chain B
residue 358-380
type TRANSMEM
sequence INWAKLGILVGSISSAVIGYSWL
description Helical; Name=12 => ECO:0000269|PubMed:25422503, ECO:0007744|PDB:4ATV, ECO:0007744|PDB:4AU5
source Swiss-Prot : SWS_FT_FI14


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