|
|
eF-site ID
|
1z8y-S |
|
PDB Code
|
1z8y |
|
Chain
|
S |
|
click to enlarge
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Title
|
Mapping the E2 Glycoprotein of Alphaviruses |
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Classification
|
VIRUS |
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Compound
|
Spike glycoprotein E1 |
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Source
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ORGANISM_SCIENTIFIC: Sindbis virus; |
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Sequence
|
S: |
RLFDVKNEDGDVIGHALAMEGKVMKPLHVKGTIDHPVLSK
LKFTKSSAYDMEFAQLPVNMRSEAFTYTSEHPEGFYNWHH
GAVQYSGGRFTIPRGVGGRGDSGRPIMDNSGRVVAIVLGG
ADEGTRTALSVVTWNSKGKTIKTTPEGTEEW
|
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Description
|
(1) |
Spike glycoprotein E1, Spike glycoprotein E2, Capsid protein C (E.C.3.4.21.-)
|
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Functional site
|
|
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1)
|
chain |
S |
| residue |
189 |
| type |
SITE |
| sequence |
Y
|
| description |
Involved in dimerization of the capsid protein => ECO:0000250|UniProtKB:Q86925
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
2)
|
chain |
S |
| residue |
222 |
| type |
SITE |
| sequence |
N
|
| description |
Involved in dimerization of the capsid protein => ECO:0000250|UniProtKB:Q86925
|
| source |
Swiss-Prot : SWS_FT_FI2
|
|
|
3)
|
chain |
S |
| residue |
264 |
| type |
SITE |
| sequence |
W
|
| description |
Cleavage; by autolysis => ECO:0000250|UniProtKB:P03315
|
| source |
Swiss-Prot : SWS_FT_FI3
|
|
|
4)
|
chain |
S |
| residue |
141 |
| type |
ACT_SITE |
| sequence |
H
|
| description |
Charge relay system => ECO:0000255|PROSITE-ProRule:PRU01027, ECO:0000269|PubMed:1944569
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
5)
|
chain |
S |
| residue |
163 |
| type |
ACT_SITE |
| sequence |
D
|
| description |
Charge relay system => ECO:0000255|PROSITE-ProRule:PRU01027, ECO:0000269|PubMed:1944569
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
6)
|
chain |
S |
| residue |
215 |
| type |
ACT_SITE |
| sequence |
S
|
| description |
Charge relay system => ECO:0000255|PROSITE-ProRule:PRU01027, ECO:0000269|PubMed:1944569
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|