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eF-site ID
|
1z8y-GH |
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PDB Code
|
1z8y |
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Chain
|
G, H |
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click to enlarge
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Title
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Mapping the E2 Glycoprotein of Alphaviruses |
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Classification
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VIRUS |
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Compound
|
Spike glycoprotein E1 |
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Source
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ORGANISM_SCIENTIFIC: Sindbis virus; |
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Sequence
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G: |
YEHATTVPNVPQIPYKALVERAGYAPLNLEITVMSSEVLP
STNQEYITCKFTTVVPSPKIKCCGSLECQPAAHADYTCKV
FGGVYPFMWGGAQCFCDSENSQMSEAYVELSADCASDHAQ
AIKVHTAAMKVGLRIVYGNTTSFLDVYVNGVTPGTSKDLK
VIAGPISASFTPFDHKVVIHRGLVYNYDFPEYGAMKPGAF
GDIQATSLTSKDLIASTDIRLLKPSAKNVHVPYTQASSGF
EMWKNNSGRPLQETAPFGCKIAVNPLRAVDCSYGNIPISI
DIPNAAFIRT
|
| H: |
LVSTVKCEVSECTYSADFGGMATLQYVSDREGQCPVHSHS
STATLQESTVHVLEKGAVTVHFSTASPQANFIVSLCGKKT
TCNAECKPP
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Description
|
(1) |
Spike glycoprotein E1, Spike glycoprotein E2, Capsid protein C (E.C.3.4.21.-)
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Functional site
|
|
|
1)
|
chain |
G |
| residue |
139 |
| type |
TRANSMEM |
| sequence |
N
|
| description |
Helical => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI1
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2)
|
chain |
G |
| residue |
245 |
| type |
TRANSMEM |
| sequence |
N
|
| description |
Helical => ECO:0000255
|
| source |
Swiss-Prot : SWS_FT_FI1
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