eF-site ID 1z6j-L
PDB Code 1z6j
Chain L

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Title Crystal Structure of a ternary complex of Factor VIIa/Tissue Factor/Pyrazinone Inhibitor
Classification HYDROLASE
Compound Coagulation factor VII
Source (TF_HUMAN)
Sequence L:  ANAFLXXLRPGSLXRXCKXXQCSFXXARXIFKDAXRTKLF
WISYSDGDQCASSPCQNGGSCKDQLQSYICFCLPAFEGRN
CETHKDDQLICVNENGGCEQYCSDHTGTKRSCRCHEGYSL
LADGVSCTPTVEYPCGKIPILE
Description (1)  Blood coagulation factor VIIa (E.C.3.4.21.21), Soluble tissue factor, Pyrazinone inhibitor with benzamidine as the P1 warhead


Functional site

1) chain L
residue 46
type
sequence D
description BINDING SITE FOR RESIDUE CA L 401
source : AC2

2) chain L
residue 47
type
sequence G
description BINDING SITE FOR RESIDUE CA L 401
source : AC2

3) chain L
residue 49
type
sequence Q
description BINDING SITE FOR RESIDUE CA L 401
source : AC2

4) chain L
residue 63
type
sequence D
description BINDING SITE FOR RESIDUE CA L 401
source : AC2

5) chain L
residue 64
type
sequence Q
description BINDING SITE FOR RESIDUE CA L 401
source : AC2

6) chain L
residue 14
type
sequence X
description BINDING SITE FOR RESIDUE MG L 402
source : AC3

7) chain L
residue 19
type
sequence X
description BINDING SITE FOR RESIDUE MG L 402
source : AC3

8) chain L
residue 60
type CARBOHYD
sequence S
description O-linked (Fuc) serine => ECO:0000269|PubMed:1904059, ECO:0000269|PubMed:9023546
source Swiss-Prot : SWS_FT_FI6

9) chain L
residue 52
type CARBOHYD
sequence S
description O-linked (Xyl...) serine; alternate => ECO:0000269|PubMed:1904059, ECO:0000269|PubMed:2129367, ECO:0000269|PubMed:21949356, ECO:0000269|PubMed:2511201
source Swiss-Prot : SWS_FT_FI5

10) chain L
residue 61-72
type prosite
sequence CKDQLQSYICFC
description ASX_HYDROXYL Aspartic acid and asparagine hydroxylation site. CkDqlqsYiCfC
source prosite : PS00010

11) chain L
residue 16-41
type prosite
sequence XCKXXQCSFXXARXIFKDAXRTKLFW
description GLA_1 Vitamin K-dependent carboxylation domain. EckEEqCsfeearEifkdaertkl.FW
source prosite : PS00011

12) chain L
residue 70-81
type prosite
sequence CFCLPAFEGRNC
description EGF_1 EGF-like domain signature 1. CfClpAfeGRnC
source prosite : PS00022

13) chain L
residue 112-127
type prosite
sequence CRCHEGYSLLADGVSC
description EGF_2 EGF-like domain signature 2. CrCheGYslladgvsC
source prosite : PS01186

14) chain L
residue 46-70
type prosite
sequence DGDQCASSPCQNGGSCKDQLQSYIC
description EGF_CA Calcium-binding EGF-like domain signature. DgDQCassp..........Cqnggs..CkDqlqsYiC
source prosite : PS01187

15) chain L
residue 7
type BINDING
sequence X
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

16) chain L
residue 14
type BINDING
sequence X
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

17) chain L
residue 16
type BINDING
sequence X
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

18) chain L
residue 20
type BINDING
sequence X
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

19) chain L
residue 25
type BINDING
sequence X
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

20) chain L
residue 26
type BINDING
sequence X
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

21) chain L
residue 29
type BINDING
sequence X
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

22) chain L
residue 35
type BINDING
sequence X
description BINDING => ECO:0000250
source Swiss-Prot : SWS_FT_FI2

23) chain L
residue 63
type MOD_RES
sequence D
description (3R)-3-hydroxyaspartate => ECO:0000269|PubMed:3264725
source Swiss-Prot : SWS_FT_FI4


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