eF-site ID 1ynr-D
PDB Code 1ynr
Chain D

click to enlarge
Title Crystal structure of the cytochrome c-552 from Hydrogenobacter thermophilus at 2.0 resolution
Classification ELECTRON TRANSPORT
Compound Cytochrome c-552
Source Hydrogenobacter thermophilus (strain DSM 6534 / IAM 12695 / TK-6) (CY552_HYDTH)
Sequence D:  NEQLAKQKGCMACHDLKAKKVGPAYADVAKKYAGRKDAVD
YLAGKIKKGGSGVWGSVPMPPQNVTDAEAKQLAQWILSI
Description


Functional site

1) chain D
residue 6
type
sequence K
description BINDING SITE FOR RESIDUE SO4 C 503
source : AC3

2) chain D
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

3) chain D
residue 13
type
sequence C
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

4) chain D
residue 14
type
sequence H
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

5) chain D
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

6) chain D
residue 23
type
sequence P
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

7) chain D
residue 25
type
sequence Y
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

8) chain D
residue 32
type
sequence Y
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

9) chain D
residue 41
type
sequence Y
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

10) chain D
residue 45
type
sequence K
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

11) chain D
residue 46
type
sequence I
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

12) chain D
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

13) chain D
residue 51
type
sequence S
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

14) chain D
residue 52
type
sequence G
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

15) chain D
residue 53
type
sequence V
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

16) chain D
residue 54
type
sequence W
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

17) chain D
residue 55
type
sequence G
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

18) chain D
residue 57
type
sequence V
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

19) chain D
residue 59
type
sequence M
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

20) chain D
residue 62
type
sequence Q
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

21) chain D
residue 64
type
sequence V
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

22) chain D
residue 9
type
sequence G
description BINDING SITE FOR RESIDUE MPD A 603
source : AC9

23) chain D
residue 12
type
sequence A
description BINDING SITE FOR RESIDUE MPD A 603
source : AC9

24) chain D
residue 36
type
sequence K
description BINDING SITE FOR RESIDUE MPD D 605
source : BC6

25) chain D
residue 10
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

26) chain D
residue 13
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

27) chain D
residue 14
type BINDING
sequence H
description axial binding residue
source Swiss-Prot : SWS_FT_FI2

28) chain D
residue 59
type BINDING
sequence M
description axial binding residue
source Swiss-Prot : SWS_FT_FI2


Display surface

Download
Links