eF-site ID 1ynr-ABCD
PDB Code 1ynr
Chain A, B, C, D

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Title Crystal structure of the cytochrome c-552 from Hydrogenobacter thermophilus at 2.0 resolution
Classification ELECTRON TRANSPORT
Compound Cytochrome c-552
Source null (CY552_HYDTH)
Sequence A:  NEQLAKQKGCMACHDLKAKKVGPAYADVAKKYAGRKDAVD
YLAGKIKKGGSGVWGSVPMPPQNVTDAEAKQLAQWILSIK
B:  NEQLAKQKGCMACHDLKAKKVGPAYADVAKKYAGRKDAVD
YLAGKIKKGGSGVWGSVPMPPQNVTDAEAKQLAQWILSI
C:  NEQLAKQKGCMACHDLKAKKVGPAYADVAKKYAGRKDAVD
YLAGKIKKGGSGVWGSVPMPPQNVTDAEAKQLAQWILSIK
D:  NEQLAKQKGCMACHDLKAKKVGPAYADVAKKYAGRKDAVD
YLAGKIKKGGSGVWGSVPMPPQNVTDAEAKQLAQWILSI
Description


Functional site

1) chain A
residue 7
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 A 502
source : AC1

2) chain A
residue 8
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 502
source : AC1

3) chain B
residue 6
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 502
source : AC1

4) chain C
residue 20
type
sequence K
description BINDING SITE FOR RESIDUE SO4 A 502
source : AC1

5) chain B
residue 47
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 501
source : AC2

6) chain B
residue 65
type
sequence T
description BINDING SITE FOR RESIDUE SO4 B 501
source : AC2

7) chain B
residue 66
type
sequence D
description BINDING SITE FOR RESIDUE SO4 B 501
source : AC2

8) chain C
residue 19
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 501
source : AC2

9) chain A
residue 20
type
sequence K
description BINDING SITE FOR RESIDUE SO4 C 503
source : AC3

10) chain C
residue 7
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 C 503
source : AC3

11) chain C
residue 8
type
sequence K
description BINDING SITE FOR RESIDUE SO4 C 503
source : AC3

12) chain D
residue 6
type
sequence K
description BINDING SITE FOR RESIDUE SO4 C 503
source : AC3

13) chain A
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

14) chain A
residue 13
type
sequence C
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

15) chain A
residue 14
type
sequence H
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

16) chain A
residue 21
type
sequence V
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

17) chain A
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

18) chain A
residue 23
type
sequence P
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

19) chain A
residue 32
type
sequence Y
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

20) chain A
residue 41
type
sequence Y
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

21) chain A
residue 45
type
sequence K
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

22) chain A
residue 46
type
sequence I
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

23) chain A
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

24) chain A
residue 51
type
sequence S
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

25) chain A
residue 52
type
sequence G
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

26) chain A
residue 53
type
sequence V
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

27) chain A
residue 54
type
sequence W
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

28) chain A
residue 55
type
sequence G
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

29) chain A
residue 57
type
sequence V
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

30) chain A
residue 59
type
sequence M
description BINDING SITE FOR RESIDUE HEC A 81
source : AC4

31) chain B
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

32) chain B
residue 13
type
sequence C
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

33) chain B
residue 14
type
sequence H
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

34) chain B
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

35) chain B
residue 23
type
sequence P
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

36) chain B
residue 25
type
sequence Y
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

37) chain B
residue 32
type
sequence Y
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

38) chain B
residue 41
type
sequence Y
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

39) chain B
residue 45
type
sequence K
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

40) chain B
residue 46
type
sequence I
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

41) chain B
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

42) chain B
residue 51
type
sequence S
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

43) chain B
residue 52
type
sequence G
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

44) chain B
residue 53
type
sequence V
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

45) chain B
residue 54
type
sequence W
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

46) chain B
residue 55
type
sequence G
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

47) chain B
residue 57
type
sequence V
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

48) chain B
residue 59
type
sequence M
description BINDING SITE FOR RESIDUE HEC B 81
source : AC5

49) chain C
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

50) chain C
residue 13
type
sequence C
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

51) chain C
residue 14
type
sequence H
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

52) chain C
residue 21
type
sequence V
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

53) chain C
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

54) chain C
residue 23
type
sequence P
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

55) chain C
residue 32
type
sequence Y
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

56) chain C
residue 41
type
sequence Y
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

57) chain C
residue 42
type
sequence L
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

58) chain C
residue 45
type
sequence K
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

59) chain C
residue 46
type
sequence I
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

60) chain C
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

61) chain C
residue 51
type
sequence S
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

62) chain C
residue 52
type
sequence G
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

63) chain C
residue 53
type
sequence V
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

64) chain C
residue 54
type
sequence W
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

65) chain C
residue 55
type
sequence G
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

66) chain C
residue 57
type
sequence V
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

67) chain C
residue 59
type
sequence M
description BINDING SITE FOR RESIDUE HEC C 81
source : AC6

68) chain D
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

69) chain D
residue 13
type
sequence C
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

70) chain D
residue 14
type
sequence H
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

71) chain D
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

72) chain D
residue 23
type
sequence P
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

73) chain D
residue 25
type
sequence Y
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

74) chain D
residue 32
type
sequence Y
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

75) chain D
residue 41
type
sequence Y
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

76) chain D
residue 45
type
sequence K
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

77) chain D
residue 46
type
sequence I
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

78) chain D
residue 50
type
sequence G
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

79) chain D
residue 51
type
sequence S
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

80) chain D
residue 52
type
sequence G
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

81) chain D
residue 53
type
sequence V
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

82) chain D
residue 54
type
sequence W
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

83) chain D
residue 55
type
sequence G
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

84) chain D
residue 57
type
sequence V
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

85) chain D
residue 59
type
sequence M
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

86) chain D
residue 62
type
sequence Q
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

87) chain D
residue 64
type
sequence V
description BINDING SITE FOR RESIDUE HEC D 81
source : AC7

88) chain A
residue 19
type
sequence K
description BINDING SITE FOR RESIDUE MPD A 601
source : AC8

89) chain A
residue 20
type
sequence K
description BINDING SITE FOR RESIDUE MPD A 601
source : AC8

90) chain A
residue 21
type
sequence V
description BINDING SITE FOR RESIDUE MPD A 601
source : AC8

91) chain A
residue 22
type
sequence G
description BINDING SITE FOR RESIDUE MPD A 601
source : AC8

92) chain A
residue 12
type
sequence A
description BINDING SITE FOR RESIDUE MPD A 603
source : AC9

93) chain C
residue 63
type
sequence N
description BINDING SITE FOR RESIDUE MPD A 603
source : AC9

94) chain D
residue 9
type
sequence G
description BINDING SITE FOR RESIDUE MPD A 603
source : AC9

95) chain D
residue 12
type
sequence A
description BINDING SITE FOR RESIDUE MPD A 603
source : AC9

96) chain A
residue 32
type
sequence Y
description BINDING SITE FOR RESIDUE MPD A 606
source : BC1

97) chain A
residue 35
type
sequence R
description BINDING SITE FOR RESIDUE MPD A 606
source : BC1

98) chain A
residue 37
type
sequence D
description BINDING SITE FOR RESIDUE MPD A 606
source : BC1

99) chain B
residue 12
type
sequence A
description BINDING SITE FOR RESIDUE MPD B 602
source : BC2

100) chain C
residue 12
type
sequence A
description BINDING SITE FOR RESIDUE MPD B 602
source : BC2

101) chain C
residue 13
type
sequence C
description BINDING SITE FOR RESIDUE MPD B 602
source : BC2

102) chain B
residue 32
type
sequence Y
description BINDING SITE FOR RESIDUE MPD B 607
source : BC3

103) chain B
residue 35
type
sequence R
description BINDING SITE FOR RESIDUE MPD B 607
source : BC3

104) chain B
residue 36
type
sequence K
description BINDING SITE FOR RESIDUE MPD B 607
source : BC3

105) chain B
residue 38
type
sequence A
description BINDING SITE FOR RESIDUE MPD B 607
source : BC3

106) chain B
residue 41
type
sequence Y
description BINDING SITE FOR RESIDUE MPD B 607
source : BC3

107) chain B
residue 63
type
sequence N
description BINDING SITE FOR RESIDUE MPD C 604
source : BC4

108) chain C
residue 20
type
sequence K
description BINDING SITE FOR RESIDUE MPD C 604
source : BC4

109) chain C
residue 35
type
sequence R
description BINDING SITE FOR RESIDUE MPD C 608
source : BC5

110) chain C
residue 41
type
sequence Y
description BINDING SITE FOR RESIDUE MPD C 608
source : BC5

111) chain D
residue 36
type
sequence K
description BINDING SITE FOR RESIDUE MPD D 605
source : BC6

112) chain B
residue 10
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

113) chain B
residue 13
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

114) chain C
residue 10
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

115) chain C
residue 13
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

116) chain D
residue 10
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

117) chain D
residue 13
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

118) chain A
residue 10
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

119) chain A
residue 13
type BINDING
sequence C
description covalent
source Swiss-Prot : SWS_FT_FI1

120) chain B
residue 14
type BINDING
sequence H
description axial binding residue
source Swiss-Prot : SWS_FT_FI2

121) chain B
residue 59
type BINDING
sequence M
description axial binding residue
source Swiss-Prot : SWS_FT_FI2

122) chain C
residue 14
type BINDING
sequence H
description axial binding residue
source Swiss-Prot : SWS_FT_FI2

123) chain C
residue 59
type BINDING
sequence M
description axial binding residue
source Swiss-Prot : SWS_FT_FI2

124) chain D
residue 14
type BINDING
sequence H
description axial binding residue
source Swiss-Prot : SWS_FT_FI2

125) chain D
residue 59
type BINDING
sequence M
description axial binding residue
source Swiss-Prot : SWS_FT_FI2

126) chain A
residue 14
type BINDING
sequence H
description axial binding residue
source Swiss-Prot : SWS_FT_FI2

127) chain A
residue 59
type BINDING
sequence M
description axial binding residue
source Swiss-Prot : SWS_FT_FI2


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