|
eF-site ID
|
1yn6-A |
PDB Code
|
1yn6 |
Chain
|
A |
|
click to enlarge
|
|
Title
|
Crystal structure of a mouse MHC class I protein, H2-Db, in complex with a peptide from the influenza A acid polymerase |
Classification
|
IMMUNE SYSTEM |
Compound
|
H-2 class I histocompatibility antigen, D-B alpha chain |
Source
|
Mus musculus (Mouse) (RRP2_IAZI1) |
|
Sequence
|
A: |
PHSMRYFETAVSRPGLEEPRYISVGYVDNKEFVRFDSDAE
NPRYEPRAPWMEQEGPEYWERETQKAKGQEQWFRVSLRNL
LGYYNQSAGGSHTLQQMSGCDLGSDWRLLRGYLQFAYEGR
DYIALNEDLKTWTAADMAAQITRRKWEQSGAAEHYKAYLE
GECVEWLHRYLKNGNATLLRTDSPKAHVTHHPRSKGEVTL
RCWALGFYPADITLTWQLNGEELTQDMELVETRPAGDGTF
QKWASVVVPLGKEQNYTCRVYHEGLPEPLTLRW
|
|
Description
|
(1) |
H-2 class I histocompatibility antigen, D-B alpha chain, Beta-2-microglobulin, 10-mer peptide from RNA-directed RNA polymerase subunit P2 (E.C.2.7.7.48)
|
|
Functional site
|
|
1)
|
chain |
A |
residue |
176 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine => ECO:0000305
|
source |
Swiss-Prot : SWS_FT_FI2
|
|
2)
|
chain |
A |
residue |
256 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:3980466
|
source |
Swiss-Prot : SWS_FT_FI3
|
|
3)
|
chain |
A |
residue |
86 |
type |
CARBOHYD |
sequence |
N
|
description |
N-linked (GlcNAc...) asparagine => ECO:0000269|PubMed:3980466, ECO:0000269|PubMed:7118212
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
4)
|
chain |
A |
residue |
257-263 |
type |
prosite |
sequence |
YTCRVYH
|
description |
IG_MHC Immunoglobulins and major histocompatibility complex proteins signature. YACRVKH
|
source |
prosite : PS00290
|
|
|
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