eF-site ID 1yce-v
PDB Code 1yce
Chain v

click to enlarge
Title Structure of the rotor ring of F-type Na+-ATPase from Ilyobacter tartaricus
Classification MEMBRANE PROTEIN
Compound subunit c
Source ORGANISM_SCIENTIFIC: Ilyobacter tartaricus;
Sequence v:  MDMLFAKTVVLAASAVGAGTAMIAGIGPGVGQGYAAGKAV
ESVARQPEAKGDIISTMVLGQAVAESTGIYSLVIALILLY
ANPFVGLLG
Description


Functional site

1) chain v
residue 63
type
sequence V
description BINDING SITE FOR RESIDUE NA l 201
source : DC7

2) chain v
residue 64
type
sequence A
description BINDING SITE FOR RESIDUE NA l 201
source : DC7

3) chain v
residue 66
type
sequence S
description BINDING SITE FOR RESIDUE NA l 201
source : DC7

4) chain v
residue 67
type
sequence T
description BINDING SITE FOR RESIDUE NA l 201
source : DC7

5) chain v
residue 32
type
sequence Q
description BINDING SITE FOR RESIDUE NA v 201
source : EC8

6) chain v
residue 65
type
sequence E
description BINDING SITE FOR RESIDUE NA v 201
source : EC8

7) chain v
residue 5
type
sequence F
description BINDING SITE FOR RESIDUE F09 v 314
source : GC3

8) chain v
residue 9-29
type TRANSMEM
sequence VVLAASAVGAGTAMIAGIGPG
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

9) chain v
residue 68-88
type TRANSMEM
sequence GIYSLVIALILLYANPFVGLL
description Helical => ECO:0000255
source Swiss-Prot : SWS_FT_FI2

10) chain v
residue 1-8
type TOPO_DOM
sequence MDMLFAKT
description Periplasmic
source Swiss-Prot : SWS_FT_FI1

11) chain v
residue 89
type TOPO_DOM
sequence G
description Periplasmic
source Swiss-Prot : SWS_FT_FI1

12) chain v
residue 30-67
type TOPO_DOM
sequence VGQGYAAGKAVESVARQPEAKGDIISTMVLGQAVAEST
description Cytoplasmic
source Swiss-Prot : SWS_FT_FI3

13) chain v
residue 65
type SITE
sequence E
description Reversibly binds sodium during transport
source Swiss-Prot : SWS_FT_FI4


Display surface

Download
Links