eF-site ID 1y99-AB
PDB Code 1y99
Chain A, B

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Title HIV-1 subtype A DIS RNA duplex
Classification RNA
Compound 5'-R(*CP*UP*UP*GP*CP*UP*GP*AP*GP*GP*UP*GP*CP*AP*CP*AP*CP*AP*GP*CP*AP*AP*G)-3'
Source (1Y99)
Sequence A:  CUUGCUGAGGUGCACACAGCAAG
B:  CUUGCUGAGGUGCACACAGCAAG
Description


Functional site

1) chain A
residue 12
type
sequence G
description BINDING SITE FOR RESIDUE MG A 710
source : AC1

2) chain A
residue 3
type
sequence U
description BINDING SITE FOR RESIDUE MG A 720
source : AC2

3) chain A
residue 4
type
sequence G
description BINDING SITE FOR RESIDUE MG A 720
source : AC2

4) chain B
residue 19
type
sequence G
description BINDING SITE FOR RESIDUE MG A 720
source : AC2

5) chain B
residue 20
type
sequence C
description BINDING SITE FOR RESIDUE MG A 720
source : AC2

6) chain B
residue 3
type
sequence U
description BINDING SITE FOR RESIDUE MG B 730
source : AC3

7) chain B
residue 4
type
sequence G
description BINDING SITE FOR RESIDUE MG B 730
source : AC3

8) chain A
residue 9
type
sequence G
description BINDING SITE FOR RESIDUE MG B 750
source : AC4

9) chain B
residue 9
type
sequence G
description BINDING SITE FOR RESIDUE MG B 750
source : AC4

10) chain B
residue 10
type
sequence G
description BINDING SITE FOR RESIDUE MG B 750
source : AC4

11) chain A
residue 8
type
sequence A
description BINDING SITE FOR RESIDUE MG A 760
source : AC5

12) chain A
residue 9
type
sequence G
description BINDING SITE FOR RESIDUE MG A 760
source : AC5


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