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eF-site ID
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1y69-8KU |
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PDB Code
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1y69 |
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Chain
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8, K, U |
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click to enlarge
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Title
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RRF domain I in complex with the 50S ribosomal subunit from Deinococcus radiodurans |
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Classification
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RIBOSOME |
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Compound
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23S ribosomal RNA |
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Source
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ORGANISM_SCIENTIFIC: Deinococcus radiodurans R1; |
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Sequence
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8: |
MISDIRKDAEVRMDKCVEAFKTQISKIRTGGGGTEERRKD
LTKIVRGEAEQARVAVRNVRRDANDKVKALLKDKEISEDD
DRRSQDDVQKLTDAAIKKIEAALADKEAELMQF
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| K: |
KRTKFRKQFRGRMTGDAKGGDYVAFGDYGLIAMEPAWIKS
NQIEACRIVMSRHFRRGGKIYIRIFPDKPVTKKPAETRMG
KGKGAVEYWVSVVKPGRVMFEVAGVTEEQAKEAFRLAGHK
LPIQTKMVKREVYDEA
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| U: |
AHKKGVGSSKNGRDSNPKYLGVKKFGGEVVKAGNILVRQR
GTKFKAGQGVGMGRDHTLFALSDGKVVFINKGKGARFISI
EAAQ
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Description
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Functional site
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1)
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chain |
8 |
| residue |
90 |
| type |
MOD_RES |
| sequence |
K
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| description |
N6-acetyllysine => ECO:0000255|HAMAP-Rule:MF_00040, ECO:0000269|PubMed:18723842
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| source |
Swiss-Prot : SWS_FT_FI1
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2)
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chain |
K |
| residue |
60-71 |
| type |
prosite |
| sequence |
RRGGKIYIRIFP
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| description |
RIBOSOMAL_L16_1 Ribosomal protein L16 signature 1. RRgGKIYIRIFP
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| source |
prosite : PS00586
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3)
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chain |
K |
| residue |
83-94 |
| type |
prosite |
| sequence |
RMGKGKGAVEYW
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| description |
RIBOSOMAL_L16_2 Ribosomal protein L16 signature 2. RMGkGKGaveyW
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| source |
prosite : PS00701
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4)
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chain |
U |
| residue |
34-48 |
| type |
prosite |
| sequence |
GNILVRQRGTKFKAG
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| description |
RIBOSOMAL_L27 Ribosomal protein L27 signature. GnILvRQRGtkfkaG
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| source |
prosite : PS00831
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