eF-site ID 1y1v-J
PDB Code 1y1v
Chain J

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Title Refined RNA Polymerase II-TFIIS complex
Classification TRANSFERASE/TRANSCRIPTION
Compound DNA-directed RNA polymerase II largest subunit
Source ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae;
Sequence J:  MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLG
LKRYCCRRMILTHVDLIEKFLRYNP
Description


Functional site

1) chain J
residue 7
type
sequence C
description BINDING SITE FOR RESIDUE ZN J 101
source : AC8

2) chain J
residue 9
type
sequence S
description BINDING SITE FOR RESIDUE ZN J 101
source : AC8

3) chain J
residue 10
type
sequence C
description BINDING SITE FOR RESIDUE ZN J 101
source : AC8

4) chain J
residue 45
type
sequence C
description BINDING SITE FOR RESIDUE ZN J 101
source : AC8

5) chain J
residue 46
type
sequence C
description BINDING SITE FOR RESIDUE ZN J 101
source : AC8

6) chain J
residue 10
type ZN_FING
sequence C
description TFIIS-type => ECO:0000255|PROSITE-ProRule:PRU00472
source Swiss-Prot : SWS_FT_FI1

7) chain J
residue 45
type ZN_FING
sequence C
description TFIIS-type => ECO:0000255|PROSITE-ProRule:PRU00472
source Swiss-Prot : SWS_FT_FI1

8) chain J
residue 46
type ZN_FING
sequence C
description TFIIS-type => ECO:0000255|PROSITE-ProRule:PRU00472
source Swiss-Prot : SWS_FT_FI1

9) chain J
residue 2-11
type prosite
sequence IVPVRCFSCG
description RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG
source prosite : PS01112


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