eF-site ID 1y1v-A PDB Code 1y1v Chain A click to enlarge Title Refined RNA Polymerase II-TFIIS complex Classification TRANSFERASE/TRANSCRIPTION Compound DNA-directed RNA polymerase II largest subunit Source ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; Sequence A:  VGQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETM DETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHF GHIDLAKPVFHVGFIAKIKKVCECVCMHCGKLLLDEHNEL MRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQL VSRGGCGNTQPTIRKDGLKLVGSWKDEPELRVLSTEEILN IFKHISVKDFTSLGFNEVFSRPEWMILTCLPVPPPPVRPS ISFNESQRGEDDLTFKLADILKANISLETLEHNGAPHHAI EEAESLLQFHVATYMDNDIAGQPQALQKSGRPVKSIRARL KGKEGRIRGNLMGKRVDFSARTVISGDPNLELDQVGVPKS IAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPGAKYVIRDS GDRIDLRYSKRAGDIQLQYGWKVERHIMDNDPVLFNRQPS LHKMSMMAHRVKVIPYSTFRLNLSVTSPYNADFDGDEMNL HVPQSEETRAELSQLCAVPLQIVSPQSNKPCMGIVQDTLC GIRKLTLRDTFIELDQVLNMLYWVPDWDGVIPTPAIIKPK PLWSGKQILSVAIPNGIHLQRFDEGTTLLSPKDNGMLIID GQIIFGVVEKKTVGSSNGGLIHVVTREKGPQVCAKLFGNI QKVVNFWLLHNGFSTGIGDTIADGPTMREITETIAEAKKK VLDVTKEAQANLLTAKHGMTLRESFEDNVVRFLNEARDKA GRLAEVNLKDLNNVKQMVMAGSKGSFINIAQMSACVGQQS VEGKRIAFGFVDRTLPHFSKDDYSPESKGFVENSYLRGLT PQEFFFHAMGGREGLIDTAVKTAETGYIQRRLVKALEDIM VHYDNTTRNSLGNVIQFIYGEDGMDAAHIEKQSLDTIGGS DAAFEKRYRVDLLNTDHTLDPSLLESGSEILGDLKLQVLL DEEYKQLVKDRKFLREVFVDGEANWPLPVNIRRIIQNAQQ TFHIDHTKPSDLTIKDIVLGVKDLQENLLVLRGKNEIIQN AQRDAVTLFCCLLRSRLATRRVLQEYRLTKQAFDWVLSNI EAQFLRSVVHPGEMVGVLAAQSIGEPATQMTLNTFHFAGV ASKKVTSGVPRLKEILNVAKNMKTPSLTVYLEPGHAADQE QAKLIRSAIEHTTLKSVTIASEIYYDPDPRSTVIPEDEEI IQLHFSLQQSPWLLRLELDRAAMNDKDLTMGQVGERIKQT FKNDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENTMLE NITLRGVENIERVVMMKYDRKVPSPTGEYVKEPEWVLETD GVNLSEVMTVPGIDPTRIYTNSFIDIMEVLGIEAGRAALY KEVYNVIASDGSYVNYRHMALLVDVMTTQGGLTSVTRHGF NRSNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVI LGQMAPIGTGAFDVMIDEESLVKYMP Description Functional site 1) chain A residue 107 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC2 2) chain A residue 110 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC2 3) chain A residue 148 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC2 4) chain A residue 166 type sequence G description BINDING SITE FOR RESIDUE ZN A 1734 source : AC2 5) chain A residue 167 type sequence C description BINDING SITE FOR RESIDUE ZN A 1734 source : AC2 6) chain A residue 67 type sequence C description BINDING SITE FOR RESIDUE ZN A 1735 source : AC3 7) chain A residue 70 type sequence C description BINDING SITE FOR RESIDUE ZN A 1735 source : AC3 8) chain A residue 77 type sequence C description BINDING SITE FOR RESIDUE ZN A 1735 source : AC3 9) chain A residue 80 type sequence H description BINDING SITE FOR RESIDUE ZN A 1735 source : AC3 10) chain A residue 483 type catalytic sequence D description 788 source MCSA : MCSA1 11) chain A residue 485 type catalytic sequence D description 788 source MCSA : MCSA1 12) chain A residue 1085 type catalytic sequence H description 788 source MCSA : MCSA1 13) chain A residue 483 type ZN_FING sequence D description TFIIS-type => ECO:0000255|PROSITE-ProRule:PRU00472 source Swiss-Prot : SWS_FT_FI1 14) chain A residue 485 type ZN_FING sequence D description TFIIS-type => ECO:0000255|PROSITE-ProRule:PRU00472 source Swiss-Prot : SWS_FT_FI1 15) chain A residue 107 type ZN_FING sequence C description TFIIS-type => ECO:0000255|PROSITE-ProRule:PRU00472 source Swiss-Prot : SWS_FT_FI1 16) chain A residue 110 type ZN_FING sequence C description TFIIS-type => ECO:0000255|PROSITE-ProRule:PRU00472 source Swiss-Prot : SWS_FT_FI1 17) chain A residue 148 type ZN_FING sequence C description TFIIS-type => ECO:0000255|PROSITE-ProRule:PRU00472 source Swiss-Prot : SWS_FT_FI1 18) chain A residue 167 type ZN_FING sequence C description TFIIS-type => ECO:0000255|PROSITE-ProRule:PRU00472 source Swiss-Prot : SWS_FT_FI1 19) chain A residue 481 type ZN_FING sequence D description TFIIS-type => ECO:0000255|PROSITE-ProRule:PRU00472 source Swiss-Prot : SWS_FT_FI1

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