eF-site ID 1xzq-A
PDB Code 1xzq
Chain A

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Title Structure of the GTP-binding protein TrmE from Thermotoga maritima complexed with 5-formyl-THF
Classification HYDROLASE
Compound Probable tRNA modification GTPase trmE
Source Thermotoga maritima (TRME_THEMA)
Sequence A:  DTIVAVATPPGKGAIAILRLSGPDSWKIVQKHLRTRSKIV
PRKAIHGWIHENGEDVDEVVVVFYKSPKSYTGEDMVEVMC
HGGPLVVKKLLDLFLKSGARMAEPGEFTKRAFLNGKMDLT
SAEAVRDLIEAKSETSLKLSLRNLKGGLRDFVDSLRRELI
EVLAEIRVELDYPDEIETNTGEVVTRLERIKEKLTEELKK
ADAGILLNRGLRMVIVGKPNVGKSTLLNRLLNEDRAIVTD
IPGTTRDVISEEIVIRGILFRIVDTAGVRSETNDLVERLG
IERTLQEIEKADIVLFVLDASSPLDEEDRKILERIKNKRY
LVVINKVDVVEKINEEEIKNKLGTDRHMVKISALKGEGLE
KLEESIYRETQEIFERGSDSLITNLRQKQLLENVKGHLED
AIKSLKEGMPVDMASIDLERALNLLDEVTGRSFREDLLDT
IFSNFCVGK
Description


Functional site

1) chain A
residue 20
type
sequence R
description BINDING SITE FOR RESIDUE FON A 451
source : AC1

2) chain A
residue 69
type
sequence K
description BINDING SITE FOR RESIDUE FON A 451
source : AC1

3) chain A
residue 70
type
sequence S
description BINDING SITE FOR RESIDUE FON A 451
source : AC1

4) chain A
residue 71
type
sequence Y
description BINDING SITE FOR RESIDUE FON A 451
source : AC1

5) chain A
residue 78
type
sequence E
description BINDING SITE FOR RESIDUE FON A 451
source : AC1

6) chain A
residue 117
type
sequence K
description BINDING SITE FOR RESIDUE FON A 451
source : AC1

7) chain A
residue 450
type
sequence K
description BINDING SITE FOR RESIDUE FON A 451
source : AC1

8) chain A
residue 16
type
sequence I
description BINDING SITE FOR RESIDUE FON B 118
source : AC2

9) chain A
residue 47
type
sequence H
description BINDING SITE FOR RESIDUE FON B 118
source : AC2

10) chain A
residue 59
type
sequence E
description BINDING SITE FOR RESIDUE FON B 118
source : AC2

11) chain A
residue 61
type
sequence V
description BINDING SITE FOR RESIDUE FON B 118
source : AC2

12) chain A
residue 80
type
sequence M
description BINDING SITE FOR RESIDUE FON B 118
source : AC2

13) chain A
residue 82
type
sequence H
description BINDING SITE FOR RESIDUE FON B 118
source : AC2

14) chain A
residue 450
type BINDING
sequence K
description BINDING => ECO:0000255|HAMAP-Rule:MF_00379, ECO:0000269|PubMed:15616586
source Swiss-Prot : SWS_FT_FI1

15) chain A
residue 221
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00379
source Swiss-Prot : SWS_FT_FI2

16) chain A
residue 225
type BINDING
sequence S
description BINDING => ECO:0000255|HAMAP-Rule:MF_00379
source Swiss-Prot : SWS_FT_FI2

17) chain A
residue 240
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00379
source Swiss-Prot : SWS_FT_FI2

18) chain A
residue 242
type BINDING
sequence I
description BINDING => ECO:0000255|HAMAP-Rule:MF_00379
source Swiss-Prot : SWS_FT_FI2

19) chain A
residue 245
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00379
source Swiss-Prot : SWS_FT_FI2

20) chain A
residue 246
type BINDING
sequence T
description BINDING => ECO:0000255|HAMAP-Rule:MF_00379
source Swiss-Prot : SWS_FT_FI2

21) chain A
residue 265
type BINDING
sequence D
description BINDING => ECO:0000255|HAMAP-Rule:MF_00379
source Swiss-Prot : SWS_FT_FI2

22) chain A
residue 326
type BINDING
sequence N
description BINDING => ECO:0000255|HAMAP-Rule:MF_00379
source Swiss-Prot : SWS_FT_FI2

23) chain A
residue 353
type BINDING
sequence S
description BINDING => ECO:0000255|HAMAP-Rule:MF_00379
source Swiss-Prot : SWS_FT_FI2


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