eF-site ID 1xd3-A
PDB Code 1xd3
Chain A

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Title Crystal structure of UCHL3-UbVME complex
Classification HYDROLASE
Compound Ubiquitin Carboxyl-terminal esterase L3
Source Homo sapiens (Human) (UBIQ_HUMAN)
Sequence A:  EGQRWLPLEANPEVTNQFLKQLGLHPNWQFVDVYGMDPEL
LSMVPRPVCAVLLLFPITEKYEVFRTEEEEKIKSQGQDVT
SSVYFMKQTISNACGTIGLIHAIANNKDKMHFESGSTLKK
FLEESVSMSPEERARYLENYDAIRVTHETSAHEGQTEAPS
IDEKVDLHFIALVHVDGHLYELDGRKPFPINHGETSDETL
LEDAIEVCKKFMERDPDELRFNAIALSAA
Description


Functional site

1) chain A
residue 108
type
sequence K
description BINDING SITE FOR RESIDUE MG A 2006
source : AC6

2) chain A
residue 109
type
sequence D
description BINDING SITE FOR RESIDUE MG A 2006
source : AC6

3) chain A
residue 21
type
sequence K
description BINDING SITE FOR RESIDUE MG A 2010
source : BC1

4) chain A
residue 24
type
sequence G
description BINDING SITE FOR RESIDUE MG A 2010
source : BC1

5) chain A
residue 25
type
sequence L
description BINDING SITE FOR RESIDUE MG A 2010
source : BC1

6) chain A
residue 114
type
sequence E
description BINDING SITE FOR RESIDUE MG A 2010
source : BC1

7) chain A
residue 58
type
sequence I
description BINDING SITE FOR RESIDUE GVE B 1176
source : BC2

8) chain A
residue 89
type
sequence Q
description BINDING SITE FOR RESIDUE GVE B 1176
source : BC2

9) chain A
residue 93
type
sequence N
description BINDING SITE FOR RESIDUE GVE B 1176
source : BC2

10) chain A
residue 95
type
sequence C
description BINDING SITE FOR RESIDUE GVE B 1176
source : BC2

11) chain A
residue 166
type
sequence V
description BINDING SITE FOR RESIDUE GVE B 1176
source : BC2

12) chain A
residue 168
type
sequence L
description BINDING SITE FOR RESIDUE GVE B 1176
source : BC2

13) chain A
residue 169
type
sequence H
description BINDING SITE FOR RESIDUE GVE B 1176
source : BC2

14) chain A
residue 89
type catalytic
sequence Q
description 597
source MCSA : MCSA1

15) chain A
residue 95
type catalytic
sequence C
description 597
source MCSA : MCSA1

16) chain A
residue 169
type catalytic
sequence H
description 597
source MCSA : MCSA1

17) chain A
residue 184
type catalytic
sequence D
description 597
source MCSA : MCSA1

18) chain A
residue 95
type ACT_SITE
sequence C
description Nucleophile => ECO:0000269|PubMed:19154770, ECO:0000269|PubMed:20380862, ECO:0000269|PubMed:9790970
source Swiss-Prot : SWS_FT_FI1

19) chain A
residue 169
type ACT_SITE
sequence H
description Proton donor => ECO:0000250|UniProtKB:P09936
source Swiss-Prot : SWS_FT_FI2

20) chain A
residue 130
type MOD_RES
sequence S
description Phosphoserine => ECO:0007744|PubMed:18669648, ECO:0007744|PubMed:23186163, ECO:0007744|PubMed:24275569
source Swiss-Prot : SWS_FT_FI4

21) chain A
residue 89-105
type prosite
sequence QTISNACGTIGLIHAIA
description UCH_1 Ubiquitin carboxyl-terminal hydrolase family 1 cysteine active-site. QtisNACGtigLIHAIA
source prosite : PS00140

22) chain A
residue 184
type SITE
sequence D
description Important for enzyme activity => ECO:0000250|UniProtKB:P09936
source Swiss-Prot : SWS_FT_FI3


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