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eF-site ID
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1wcm-J |
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PDB Code
|
1wcm |
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Chain
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J |
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click to enlarge
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Title
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Complete 12-Subunit RNA Polymerase II at 3.8 Angstrom |
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Classification
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TRANSCRIPTION |
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Compound
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DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT |
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Source
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ORGANISM_COMMON: YEAST; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; |
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Sequence
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J: |
MIVPVRCFSCGKVVGDKWESYLNLLQEDELDEGTALSRLG
LKRYCCRRMILTHVDLIEKFLRYNP
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Description
|
(1) |
DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II SECOND LARGEST SUBUNIT (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II 45 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I, II, AND III 27 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I, II, AND III 23 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II 19 KD POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I, II, AND III 14.5 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II 14.2 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I, II AND III 8.3 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II 13.6 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I, II, AND III 7.7 KDA POLYPEPTIDE (E.C.2.7.7.6)
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Functional site
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1)
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chain |
J |
| residue |
7 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J1066
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| source |
: AC8
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2)
|
chain |
J |
| residue |
10 |
| type |
|
| sequence |
C
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| description |
BINDING SITE FOR RESIDUE ZN J1066
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| source |
: AC8
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|
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3)
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chain |
J |
| residue |
45 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J1066
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| source |
: AC8
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4)
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chain |
J |
| residue |
46 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE ZN J1066
|
| source |
: AC8
|
|
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5)
|
chain |
J |
| residue |
10 |
| type |
ZN_FING |
| sequence |
C
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| description |
C4-type
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| source |
Swiss-Prot : SWS_FT_FI1
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|
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6)
|
chain |
J |
| residue |
45 |
| type |
ZN_FING |
| sequence |
C
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| description |
C4-type
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| source |
Swiss-Prot : SWS_FT_FI1
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7)
|
chain |
J |
| residue |
46 |
| type |
ZN_FING |
| sequence |
C
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| description |
C4-type
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| source |
Swiss-Prot : SWS_FT_FI1
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|
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8)
|
chain |
J |
| residue |
2-11 |
| type |
prosite |
| sequence |
IVPVRCFSCG
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| description |
RNA_POL_N_8KD RNA polymerases N / 8 Kd subunits signature. IVPVrCFSCG
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| source |
prosite : PS01112
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