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eF-site ID
|
1wcm-C |
PDB Code
|
1wcm |
Chain
|
C |
|
click to enlarge
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Title
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Complete 12-Subunit RNA Polymerase II at 3.8 Angstrom |
Classification
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TRANSCRIPTION |
Compound
|
DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT |
Source
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ORGANISM_COMMON: YEAST; ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; |
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Sequence
|
C: |
EEGPQVKIREASKDNVDFILSNVDLAMANSLRRVMIAEIP
TLAIDSVEVETNTTVLADEFIAHRLGLIPLQSMDIEQLEY
SRDCFCEDHCDKCSVVLTLQAFGESESTTNVYSKDLVIVS
NLMGRNIGHPIIQDKEGNGVLICKLRKGQELKLTCVAKKG
IAKEHAKWGPAAAIEFEYDPWNKLKHTDYWYEQDSAKEWP
QSKNCEYEDPPNEGDPFDYKAQADTFYMNVESVGSIPVDQ
VVVRGIDTLQKKVASILLALTQMDQD
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Description
|
(1) |
DNA-DIRECTED RNA POLYMERASE II LARGEST SUBUNIT (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II SECOND LARGEST SUBUNIT (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II 45 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II 32 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I, II, AND III 27 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I, II, AND III 23 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II 19 KD POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I, II, AND III 14.5 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II 14.2 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I, II AND III 8.3 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASE II 13.6 KDA POLYPEPTIDE (E.C.2.7.7.6), DNA-DIRECTED RNA POLYMERASES I, II, AND III 7.7 KDA POLYPEPTIDE (E.C.2.7.7.6)
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Functional site
|
|
1)
|
chain |
C |
residue |
86 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN C1269
|
source |
: AC5
|
|
2)
|
chain |
C |
residue |
88 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN C1269
|
source |
: AC5
|
|
3)
|
chain |
C |
residue |
91 |
type |
|
sequence |
H
|
description |
BINDING SITE FOR RESIDUE ZN C1269
|
source |
: AC5
|
|
4)
|
chain |
C |
residue |
92 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN C1269
|
source |
: AC5
|
|
5)
|
chain |
C |
residue |
95 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE ZN C1269
|
source |
: AC5
|
|
6)
|
chain |
C |
residue |
31-71 |
type |
prosite |
sequence |
NSLRRVMIAEIPTLAIDSVEVETNTTVLADEFIAHRLGLI
P
|
description |
RNA_POL_D_30KD RNA polymerases D / 30 to 40 Kd subunits signature. NSLRRvmiaeiptlAidsVevetNtTvlaDEfIAhRLGLIP
|
source |
prosite : PS00446
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