eF-site ID 1w8x-ABCDEFGHIJKLMNP PDB Code 1w8x Chain A, B, C, D, E, F, G, H, I, J, K, L, M, N, P Title Structural analysis of PRD1 Classification VIRUS Compound MAJOR CAPSID PROTEIN (PROTEIN P3) Source ORGANISM_SCIENTIFIC: ENTEROBACTERIA PHAGE PRD1; Sequence A:  QQAALRNQQAMAANLQARQIVLQQSYPVIQQVETQTFDPA NRSVFDVTPANVGIVKGFLVKVTAAITNNHATEAVALTDF GPANLVQRVIYYDPDNQRHTETSGWHLHFVNTAKQGAPFL SSMVTDSPIKYGDVMNVIDAPATIAAGATGELTMYYWVPL AYSETDLTGAVLANVPQSKQRLKLEFANNNTAFAAVGANP LEAIYQGAGAADCEFEEISYTVYQSYLDQLPVGQNGYILP LIDLSTLYNLENSAQAGLTPNVDFVVQYANLYRYLSTIAV FDNGGSFNAGTDINYLSQRTANFSDTRKLDPKTWAAQTRR RIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVNPKTVNQN ARLLMGYEYFTSRTELVNAG B:  VQQLTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVE TQTFDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATE AVALTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTA KQGAPFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELT MYYWVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAF AAVGANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVG QNGYILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYR YLSTIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKT WAAQTRRRIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVN PKTVNQNARLLMGYEYFTSRTELVNAGTISTT C:  QQLTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVET QTFDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATEA VALTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTAK QGAPFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELTM YYWVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAFA AVGANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVGQ NGYILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYRY LSTIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKTW AAQTRRRIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVNP KTVNQNARLLMGYEYFTSRTELVNA D:  VQQLTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVE TQTFDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATE AVALTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTA KQGAPFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELT MYYWVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAF AAVGANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVG QNGYILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYR YLSTIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKT WAAQTRRRIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVN PKTVNQNARLLMGYEYFTSRTELVNAGTISTT E:  LTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVETQT FDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATEAVA LTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTAKQG APFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELTMYY WVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAFAAV GANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVGQNG YILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYRYLS TIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKTWAA QTRRRIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVNPKT VNQNARLLMGYEYFTSRT F:  LTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVETQT FDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATEAVA LTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTAKQG APFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELTMYY WVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAFAAV GANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVGQNG YILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYRYLS TIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKTWAA QTRRRIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVNPKT VNQNARLLMGYEYFTSRTELVNAGTIST G:  ALRNQQAMAANLQARQIVLQQSYPVIQQVETQTFDPANRS VFDVTPANVGIVKGFLVKVTAAITNNHATEAVALTDFGPA NLVQRVIYYDPDNQRHTETSGWHLHFVNTAKQGAPFLSSM VTDSPIKYGDVMNVIDAPATIAAGATGELTMYYWVPLAYS ETDLTGAVLANVPQSKQRLKLEFANNNTAFAAVGANPLEA IYQGAGAADCEFEEISYTVYQSYLDQLPVGQNGYILPLID LSTLYNLENSAQAGLTPNVDFVVQYANLYRYLSTIAVFDN GGSFNAGTDINYLSQRTANFSDTRKLDPKTWAAQTRRRIA TDFPKGVYYCDNRDKPIYTLQYGNVGFVVNPKTVNQNARL LMGYEYFTSRTELVN H:  VQQLTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVE TQTFDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATE AVALTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTA KQGAPFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELT MYYWVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAF AAVGANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVG QNGYILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYR YLSTIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKT WAAQTRRRIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVN PKTVNQNARLLMGYEYFTSRTELVNAGTISTT I:  VQQLTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVE TQTFDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATE AVALTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTA KQGAPFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELT MYYWVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAF AAVGANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVG QNGYILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYR YLSTIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKT WAAQTRRRIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVN PKTVNQNARLLMGYEYFTSRTELVNAGTISTT J:  VQQLTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVE TQTFDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATE AVALTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTA KQGAPFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELT MYYWVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAF AAVGANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVG QNGYILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYR YLSTIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKT WAAQTRRRIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVN PKTVNQNARLLMGYEYFTSRTELVNAGTIS K:  QQLTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVET QTFDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATEA VALTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTAK QGAPFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELTM YYWVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAFA AVGANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVGQ NGYILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYRY LSTIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKTW AAQTRRRIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVNP KTVNQNARLLMGYEYFTSRTELVN L:  QLTPAQQAALRNQQAMAANLQARQIVLQQSYPVIQQVETQ TFDPANRSVFDVTPANVGIVKGFLVKVTAAITNNHATEAV ALTDFGPANLVQRVIYYDPDNQRHTETSGWHLHFVNTAKQ GAPFLSSMVTDSPIKYGDVMNVIDAPATIAAGATGELTMY YWVPLAYSETDLTGAVLANVPQSKQRLKLEFANNNTAFAA VGANPLEAIYQGAGAADCEFEEISYTVYQSYLDQLPVGQN GYILPLIDLSTLYNLENSAQAGLTPNVDFVVQYANLYRYL STIAVFDNGGSFNAGTDINYLSQRTANFSDTRKLDPKTWA AQTRRRIATDFPKGVYYCDNRDKPIYTLQYGNVGFVVNPK TVNQNARLLMGYEYFTSRT M:  ALINPQFPYAGPVPIPGPAPTETMPLLNYRVEGRIAGIQQ ARQFMPFLQGPHRAVAEQTYHAIGTGIQMGQTFNQPLINT QEG N:  NPNQMTVTPVYNGCDSGEGPQSVRGYFDAVAGENVKYDLT YLADTQGFTGVQCIYIDNAENDGAFEIDVEETGQRIKCPA GKQGYFPLLVPGRAKFVARHLGSGKKSVPLFFLN P:  MDKKKLLYWVGGGLVLILIWLWFRNRPAAQVASNWEGPPY MTYNQPQAGSVTLPVADSITSQLNDYASSLNDYLASQAGV Description (1)  MAJOR CAPSID PROTEIN (PROTEIN P3), PROTEIN P30, PROTEIN P31, PROTEIN P16 Functional site 1) chain P residue 7-24 type TRANSMEM sequence LYWVGGGLVLILIWLWFR description Helical => ECO:0000255 source Swiss-Prot : SWS_FT_FI1

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