eF-site ID 1vwq-BP
PDB Code 1vwq
Chain B, P

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Title STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 2.5, I4122 COMPLEX
Classification COMPLEX (BIOTIN-BINDING PROTEIN/PEPTIDE)
Compound STREPTAVIDIN
Source ORGANISM_SCIENTIFIC: Streptomyces avidinii; ORGANISM_COMMON: island jararaca;
Sequence B:  AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAES
RYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTW
SGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK
V
P:  HPQGPPCKX
Description (1)  STREPTAVIDIN, PEPTIDE LIGAND CONTAINING HPQ, LEVULINIC ACID


Functional site

1) chain B
residue 84
type
sequence R
description BINDING SITE FOR RESIDUE LEA P 2
source : AC1

2) chain P
residue 1
type
sequence C
description BINDING SITE FOR RESIDUE LEA P 2
source : AC1

3) chain P
residue 1
type
sequence C
description BINDING SITE FOR RESIDUE LEA P 2
source : AC1

4) chain P
residue 3
type
sequence H
description BINDING SITE FOR RESIDUE LEA P 2
source : AC1

5) chain P
residue 4
type
sequence P
description BINDING SITE FOR RESIDUE LEA P 2
source : AC1

6) chain B
residue 43
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI1

7) chain B
residue 54
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI1

8) chain B
residue 92
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI1

9) chain B
residue 108
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 120
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI1

11) chain B
residue 118-132
type prosite
sequence NAWKSTLVGHDTFTK
description AVIDIN_1 Avidin-like domain signature. NawKStlVGhDtFTK
source prosite : PS00577


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