|
eF-site ID
|
1vwi-BDMP |
PDB Code
|
1vwi |
Chain
|
B, D, M, P |
|
click to enlarge
|
|
Title
|
STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 1.5, I222 COMPLEX |
Classification
|
COMPLEX (BIOTIN-BINDING PROTEIN/PEPTIDE) |
Compound
|
STREPTAVIDIN |
Source
|
ORGANISM_SCIENTIFIC: Streptomyces avidinii; |
|
Sequence
|
B: |
AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAES
RYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTW
SGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK
VKP
|
D: |
AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAES
RYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTW
SGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK
V
|
M: |
HPQGPPCKX
|
P: |
HPQGPPCKX
|
|
Description
|
|
Functional site
|
|
1)
|
chain |
M |
residue |
1 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE LEA M 2
|
source |
: AC1
|
|
2)
|
chain |
M |
residue |
3 |
type |
|
sequence |
H
|
description |
BINDING SITE FOR RESIDUE LEA M 2
|
source |
: AC1
|
|
3)
|
chain |
M |
residue |
4 |
type |
|
sequence |
P
|
description |
BINDING SITE FOR RESIDUE LEA M 2
|
source |
: AC1
|
|
4)
|
chain |
P |
residue |
1 |
type |
|
sequence |
C
|
description |
BINDING SITE FOR RESIDUE LEA P 2
|
source |
: AC2
|
|
5)
|
chain |
P |
residue |
3 |
type |
|
sequence |
H
|
description |
BINDING SITE FOR RESIDUE LEA P 2
|
source |
: AC2
|
|
6)
|
chain |
P |
residue |
4 |
type |
|
sequence |
P
|
description |
BINDING SITE FOR RESIDUE LEA P 2
|
source |
: AC2
|
|
7)
|
chain |
B |
residue |
118-132 |
type |
prosite |
sequence |
NAWKSTLVGHDTFTK
|
description |
AVIDIN_1 Avidin-like domain signature. NawKStlVGhDtFTK
|
source |
prosite : PS00577
|
|
8)
|
chain |
B |
residue |
43 |
type |
BINDING |
sequence |
Y
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
9)
|
chain |
D |
residue |
120 |
type |
BINDING |
sequence |
W
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
10)
|
chain |
B |
residue |
54 |
type |
BINDING |
sequence |
Y
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
11)
|
chain |
B |
residue |
92 |
type |
BINDING |
sequence |
W
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
12)
|
chain |
B |
residue |
108 |
type |
BINDING |
sequence |
W
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
13)
|
chain |
B |
residue |
120 |
type |
BINDING |
sequence |
W
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
14)
|
chain |
D |
residue |
43 |
type |
BINDING |
sequence |
Y
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
15)
|
chain |
D |
residue |
54 |
type |
BINDING |
sequence |
Y
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
16)
|
chain |
D |
residue |
92 |
type |
BINDING |
sequence |
W
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
17)
|
chain |
D |
residue |
108 |
type |
BINDING |
sequence |
W
|
description |
|
source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|