|
|
eF-site ID
|
1vwi-BDMP |
|
PDB Code
|
1vwi |
|
Chain
|
B, D, M, P |
|
click to enlarge
|
|
|
Title
|
STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 1.5, I222 COMPLEX |
|
Classification
|
COMPLEX (BIOTIN-BINDING PROTEIN/PEPTIDE) |
|
Compound
|
STREPTAVIDIN |
|
Source
|
ORGANISM_SCIENTIFIC: Streptomyces avidinii; |
|
|
Sequence
|
B: |
AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAES
RYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTW
SGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK
VKP
|
| D: |
AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAES
RYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTW
SGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK
V
|
| M: |
HPQGPPCKX
|
| P: |
HPQGPPCKX
|
|
|
Description
|
|
Functional site
|
|
|
1)
|
chain |
M |
| residue |
1 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE LEA M 2
|
| source |
: AC1
|
|
|
2)
|
chain |
M |
| residue |
3 |
| type |
|
| sequence |
H
|
| description |
BINDING SITE FOR RESIDUE LEA M 2
|
| source |
: AC1
|
|
|
3)
|
chain |
M |
| residue |
4 |
| type |
|
| sequence |
P
|
| description |
BINDING SITE FOR RESIDUE LEA M 2
|
| source |
: AC1
|
|
|
4)
|
chain |
P |
| residue |
1 |
| type |
|
| sequence |
C
|
| description |
BINDING SITE FOR RESIDUE LEA P 2
|
| source |
: AC2
|
|
|
5)
|
chain |
P |
| residue |
3 |
| type |
|
| sequence |
H
|
| description |
BINDING SITE FOR RESIDUE LEA P 2
|
| source |
: AC2
|
|
|
6)
|
chain |
P |
| residue |
4 |
| type |
|
| sequence |
P
|
| description |
BINDING SITE FOR RESIDUE LEA P 2
|
| source |
: AC2
|
|
|
7)
|
chain |
B |
| residue |
118-132 |
| type |
prosite |
| sequence |
NAWKSTLVGHDTFTK
|
| description |
AVIDIN_1 Avidin-like domain signature. NawKStlVGhDtFTK
|
| source |
prosite : PS00577
|
|
|
8)
|
chain |
B |
| residue |
43 |
| type |
BINDING |
| sequence |
Y
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
9)
|
chain |
D |
| residue |
120 |
| type |
BINDING |
| sequence |
W
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
10)
|
chain |
B |
| residue |
54 |
| type |
BINDING |
| sequence |
Y
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
11)
|
chain |
B |
| residue |
92 |
| type |
BINDING |
| sequence |
W
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
12)
|
chain |
B |
| residue |
108 |
| type |
BINDING |
| sequence |
W
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
13)
|
chain |
B |
| residue |
120 |
| type |
BINDING |
| sequence |
W
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
14)
|
chain |
D |
| residue |
43 |
| type |
BINDING |
| sequence |
Y
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
15)
|
chain |
D |
| residue |
54 |
| type |
BINDING |
| sequence |
Y
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
16)
|
chain |
D |
| residue |
92 |
| type |
BINDING |
| sequence |
W
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
17)
|
chain |
D |
| residue |
108 |
| type |
BINDING |
| sequence |
W
|
| description |
|
| source |
Swiss-Prot : SWS_FT_FI1
|
|
|
|