eF-site ID 1vwi-BDMP
PDB Code 1vwi
Chain B, D, M, P

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Title STREPTAVIDIN-CYCLO-[5-S-VALERAMIDE-HPQGPPC]K-NH2, PH 1.5, I222 COMPLEX
Classification COMPLEX (BIOTIN-BINDING PROTEIN/PEPTIDE)
Compound STREPTAVIDIN
Source ORGANISM_SCIENTIFIC: Streptomyces avidinii;
Sequence B:  AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAES
RYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTW
SGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK
VKP
D:  AEAGITGTWYNQLGSTFIVTAGADGALTGTYESAVGNAES
RYVLTGRYDSAPATDGSGTALGWTVAWKNNYRNAHSATTW
SGQYVGGAEARINTQWLLTSGTTEANAWKSTLVGHDTFTK
V
M:  HPQGPPCKX
P:  HPQGPPCKX
Description


Functional site

1) chain M
residue 1
type
sequence C
description BINDING SITE FOR RESIDUE LEA M 2
source : AC1

2) chain M
residue 3
type
sequence H
description BINDING SITE FOR RESIDUE LEA M 2
source : AC1

3) chain M
residue 4
type
sequence P
description BINDING SITE FOR RESIDUE LEA M 2
source : AC1

4) chain P
residue 1
type
sequence C
description BINDING SITE FOR RESIDUE LEA P 2
source : AC2

5) chain P
residue 3
type
sequence H
description BINDING SITE FOR RESIDUE LEA P 2
source : AC2

6) chain P
residue 4
type
sequence P
description BINDING SITE FOR RESIDUE LEA P 2
source : AC2

7) chain B
residue 118-132
type prosite
sequence NAWKSTLVGHDTFTK
description AVIDIN_1 Avidin-like domain signature. NawKStlVGhDtFTK
source prosite : PS00577

8) chain B
residue 43
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI1

9) chain D
residue 120
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI1

10) chain B
residue 54
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI1

11) chain B
residue 92
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI1

12) chain B
residue 108
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI1

13) chain B
residue 120
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI1

14) chain D
residue 43
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI1

15) chain D
residue 54
type BINDING
sequence Y
description
source Swiss-Prot : SWS_FT_FI1

16) chain D
residue 92
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI1

17) chain D
residue 108
type BINDING
sequence W
description
source Swiss-Prot : SWS_FT_FI1


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