|
eF-site ID
|
1vtl-E |
PDB Code
|
1vtl |
Chain
|
E |
|
click to enlarge
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Title
|
CO-CRYSTAL STRUCTURE OF TBP RECOGNIZING THE MINOR GROOVE OF A TATA ELEMENT |
Classification
|
TRANSCRIPTION/DNA |
Compound
|
DNA (5'-D(*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*A)-3') |
Source
|
ORGANISM_COMMON: mouse-ear cress; ORGANISM_SCIENTIFIC: ARABIDOPSIS THALIANA; |
|
Sequence
|
E: |
DLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEY
NPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSKM
AARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLEG
LAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIVI
TGAKMRDETYKAFENIYPVLSEFRKI
|
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Description
|
|
Functional site
|
|
1)
|
chain |
E |
residue |
52-101 |
type |
prosite |
sequence |
YNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSK
MAARKYARIV
|
description |
TFIID Transcription factor TFIID repeat signature. YnPkrFaaVImRirePKttaLIFaSGKMvctGAKsedfskmAarkyariV
|
source |
prosite : PS00351
|
|
2)
|
chain |
E |
residue |
143-192 |
type |
prosite |
sequence |
YEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETY
KAFENIYPVL
|
description |
TFIID Transcription factor TFIID repeat signature. YnPkrFaaVImRirePKttaLIFaSGKMvctGAKsedfskmAarkyariV
|
source |
prosite : PS00351
|
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