eF-site ID 1vol-ABCD
PDB Code 1vol
Chain A, B, C, D

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Title TFIIB (HUMAN CORE DOMAIN)/TBP (A.THALIANA)/TATA ELEMENT TERNARY COMPLEX
Classification TRANSCRIPTION/DNA
Compound DNA (5'-D(*GP*GP*CP*TP*AP*TP*AP*AP*AP*AP*GP*GP*GP*CP*TP*G)-3')
Source (1VOL)
Sequence A:  AMMNAFKEITTMADRINLPRNKVDRTNNLFRQAYEQKSLK
GRANDAIASACLYIACRQEGVPRTFKEICAVSRISKKEIG
RCFKLILKALETSVDLITTGDFMSRFCSNLCLPKQVQMAA
THIARKAVELDLVPGRSPISVAAAAIYMASQASAEKRTQK
EIGDIAGVADVTIRQSYRLIYPRAPDLFPTDFKFDTPVDK
LPQL
B:  VDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAE
YNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSK
MAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLE
GLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIV
ITGAKMRDETYKAFENIYPVLSEFRKI
C:  GGCTATAAAAGGGCTG
D:  CAGCCCTTTTATAGCC
Description


Functional site

1) chain B
residue 52-101
type prosite
sequence YNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSK
MAARKYARIV
description TFIID Transcription factor TFIID repeat signature. YnPkrFaaVImRirePKttaLIFaSGKMvctGAKsedfskmAarkyariV
source prosite : PS00351

2) chain B
residue 143-192
type prosite
sequence YEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETY
KAFENIYPVL
description TFIID Transcription factor TFIID repeat signature. YnPkrFaaVImRirePKttaLIFaSGKMvctGAKsedfskmAarkyariV
source prosite : PS00351

3) chain A
residue 153-168
type prosite
sequence GRANDAIASACLYIAC
description TFIIB Transcription factor TFIIB repeat signature. GRandAIASACLYIAC
source prosite : PS00782

4) chain A
residue 247-262
type prosite
sequence GRSPISVAAAAIYMAS
description TFIIB Transcription factor TFIIB repeat signature. GRandAIASACLYIAC
source prosite : PS00782


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