eF-site ID 1vok-AB
PDB Code 1vok
Chain A, B

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Title ARABIDOPSIS THALIANA TBP (DIMER)
Classification TRANSCRIPTION FACTOR
Compound TATA-BOX-BINDING PROTEIN
Source (TBP1_ARATH)
Sequence A:  EGSNPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQ
ARNAEYNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKS
EDFSKMAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKF
PIRLEGLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFV
SGKIVITGAKMRDETYKAFENIYPVLSEFRKI
B:  VDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAE
YNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSK
MAARKYARIVQKLGFPAKFKDFKIQNIVGSCDVKFPIRLE
GLAYSHAAFSSYEPELFPGLIYRMKVPKIVLLIFVSGKIV
ITGAKMRDETYKAFENIYPVLSEFRKIQ
Description


Functional site

1) chain B
residue 64
type
sequence I
description BINDING SITE FOR RESIDUE SO4 B 2001
source : AC1

2) chain B
residue 65
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B 2001
source : AC1

3) chain B
residue 66
type
sequence E
description BINDING SITE FOR RESIDUE SO4 B 2001
source : AC1

4) chain B
residue 96
type
sequence K
description BINDING SITE FOR RESIDUE SO4 B 2001
source : AC1

5) chain A
residue 52-101
type prosite
sequence YNPKRFAAVIMRIREPKTTALIFASGKMVCTGAKSEDFSK
MAARKYARIV
description TFIID Transcription factor TFIID repeat signature. YnPkrFaaVImRirePKttaLIFaSGKMvctGAKsedfskmAarkyariV
source prosite : PS00351

6) chain A
residue 143-192
type prosite
sequence YEPELFPGLIYRMKVPKIVLLIFVSGKIVITGAKMRDETY
KAFENIYPVL
description TFIID Transcription factor TFIID repeat signature. YnPkrFaaVImRirePKttaLIFaSGKMvctGAKsedfskmAarkyariV
source prosite : PS00351


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