eF-site ID 1uzx-B
PDB Code 1uzx
Chain B

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Title A complex of the Vps23 UEV with ubiquitin
Classification TRANSPORT PROTEIN
Compound VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS23
Source ORGANISM_COMMON: BOVINE; ORGANISM_SCIENTIFIC: BOS TAURUS;
Sequence B:  MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQ
QRLIFAGKQLEDGRTLSDYNIQKESTLHLVLRLRG
Description (1)  VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VPS23, UBIQUITIN


Functional site

1) chain B
residue 42
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B1075
source : AC1

2) chain B
residue 49
type
sequence Q
description BINDING SITE FOR RESIDUE SO4 B1075
source : AC1

3) chain B
residue 72
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B1075
source : AC1

4) chain B
residue 74
type
sequence R
description BINDING SITE FOR RESIDUE SO4 B1075
source : AC1

5) chain B
residue 27-52
type prosite
sequence KAKIQDKEGIPPDQQRLIFAGKQLED
description UBIQUITIN_1 Ubiquitin domain signature. KakIqDkegIPpdqQrLIFaGkqleD
source prosite : PS00299

6) chain B
residue 54
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

7) chain B
residue 72
type SITE
sequence R
description Interacts with activating enzyme
source Swiss-Prot : SWS_FT_FI1

8) chain B
residue 68
type SITE
sequence H
description Essential for function
source Swiss-Prot : SWS_FT_FI2

9) chain B
residue 6
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI3

10) chain B
residue 11
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI3

11) chain B
residue 27
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI3

12) chain B
residue 29
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI3

13) chain B
residue 33
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI3

14) chain B
residue 48
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI3

15) chain B
residue 63
type CROSSLNK
sequence K
description Glycyl lysine isopeptide (Lys-Gly) (interchain with G-Cter in ubiquitin) => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI3

16) chain B
residue 65
type MOD_RES
sequence S
description Phosphoserine; by PINK1 => ECO:0000250|UniProtKB:P0CG48
source Swiss-Prot : SWS_FT_FI5


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