eF-site ID 1urj-B PDB Code 1urj Chain B click to enlarge Title Single stranded DNA-binding protein(ICP8) from Herpes simplex virus-1 Classification DNA BINDING PROTEIN Compound MAJOR DNA-BINDING PROTEIN Source (DNBI_HSV11) Sequence B:  TTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAV APLVVGLTVESGFEANVAVVVGSRTTAVSLKLTPSHYSSS VYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPG DLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINN TFLHLGGSDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEP FNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVALR SRNVDAVARAAAHLAFDENHEGAALPADITFTAFGGFEQR LASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDT AAARANAVGAYLARAAGLVGAMVFSTNSALHLTEVDDAGP AHSKPSFYRFFLVPGTHVAANPQVDREGHVVPGFEGRPTA PLVGGTQEFAGEHLAMLSGFSPALLAKMLFYLERCDGAVI VMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRAR HPKFASAARGAIGVFGTMNSMYSDCDVLGNYAETYRAATE RVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNV RQVVDREVEQLMRNLVEFKFRDGLGEANHAMSLTLDPYAC GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNF RNQFQPVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPS LTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFSAYQ KPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQW FWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFIN LAPNNVSELAMYYMANQILRYCDHSTYFINTLTAIIAGSR RPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWTSM FASCNLLRPVMAARPMVVLGLSISKYVFQAGNWASLMGGK NACPLLIFDRTRKFVLACPRAGFVCAASSLCEQLRGIISE GGAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSE EMMELTARALERGNGEWSTDAALEVAHEAEA Description (1)  MAJOR DNA-BINDING PROTEIN Functional site 1) chain B residue 499 type sequence C description BINDING SITE FOR RESIDUE ZN B2131 source : AC6 2) chain B residue 502 type sequence C description BINDING SITE FOR RESIDUE ZN B2131 source : AC6 3) chain B residue 510 type sequence C description BINDING SITE FOR RESIDUE ZN B2131 source : AC6 4) chain B residue 512 type sequence H description BINDING SITE FOR RESIDUE ZN B2131 source : AC6 5) chain B residue 917 type sequence I description BINDING SITE FOR RESIDUE HG B2132 source : AC7 6) chain B residue 963 type sequence F description BINDING SITE FOR RESIDUE HG B2132 source : AC7 7) chain B residue 1013 type sequence C description BINDING SITE FOR RESIDUE HG B2132 source : AC7 8) chain B residue 1026 type sequence L description BINDING SITE FOR RESIDUE HG B2132 source : AC7 9) chain B residue 966 type sequence C description BINDING SITE FOR RESIDUE HG B2133 source : AC8 10) chain B residue 972 type sequence V description BINDING SITE FOR RESIDUE HG B2133 source : AC8 11) chain B residue 26 type sequence C description BINDING SITE FOR RESIDUE HG B2134 source : AC9 12) chain B residue 27 type sequence P description BINDING SITE FOR RESIDUE HG B2134 source : AC9 13) chain B residue 740 type sequence C description BINDING SITE FOR RESIDUE HG B2135 source : BC1 14) chain B residue 752 type sequence A description BINDING SITE FOR RESIDUE HG B2135 source : BC1 15) chain B residue 754 type sequence S description BINDING SITE FOR RESIDUE HG B2135 source : BC1 16) chain B residue 499-512 type ZN_FING sequence CNLCTFDTRHACVH description ZN_FING => ECO:0000255|HAMAP-Rule:MF_04007 source Swiss-Prot : SWS_FT_FI1

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