eF-site ID 1urj-AB PDB Code 1urj Chain A, B click to enlarge Title Single stranded DNA-binding protein(ICP8) from Herpes simplex virus-1 Classification DNA BINDING PROTEIN Compound MAJOR DNA-BINDING PROTEIN Source (DNBI_HSV11) Sequence A:  TTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAV APLVVGLTVESGFEANVAVVVGSRTTAVSLKLTPSHYSSS VYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPG DLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINN TFLHLGGSDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEP FNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVALR SRNVDAVARAAAHLAFDENHEGAALPADITFTAFAGGFEQ RLASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQD TAAARANAVGAYLARAAGLVGAMVFSTNSALHLTEVDDAG PAHSKPSFYRFFLVPGTHVAANPQVDREGHVVPGFEGRPT APLVGGTQEFAGEHLAMLSGFSPALLAKMLFYLERCDGAV IVMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRA RHPKFASAARGAIGVFGTMNSMYSDCDVLGNYAETYRAAT ERVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNN VRQVVDREVEQLMRNLVEFKFRDGLGEANHAMSLTLDPYA CGPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRN FRNQFQPVLRRRVMDMFNNGFLSAKTLTVALSAICAPSLT AGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFSAYQKP DKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQWFW TALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFINLA PNNVSELAMYYMANQILRYCDHSTYFINTLTAIIAGSRRP PSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWTSMFA SCNLLRPVMAARPMVVLGLSISKYVFQAGNWASLMGGKNA CPLLIFDRTRKFVLACPRAGFVCAASSLCEQLRGIISEGG AAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSEEM MELTARALERGNGEWSTDAALEVAHEAEA B:  TTIKVPPGPLGYVYARACPSEGIELLALLSARSGDSDVAV APLVVGLTVESGFEANVAVVVGSRTTAVSLKLTPSHYSSS VYVFHGGRHLDPSTQAPNLTRLCERARRHFGFSDYTPRPG DLKHETTGEALCERLGLDPDRALLYLVVTEGFKEAVCINN TFLHLGGSDKVTIGGAEVHRIPVYPLQLFMPDFSRVIAEP FNANHRSIGEKFTYPLPFFNRPLNRLLFEAVVGPAAVALR SRNVDAVARAAAHLAFDENHEGAALPADITFTAFGGFEQR LASVMAGDAALALESIVSMAVFDEPPTDISAWPLFEGQDT AAARANAVGAYLARAAGLVGAMVFSTNSALHLTEVDDAGP AHSKPSFYRFFLVPGTHVAANPQVDREGHVVPGFEGRPTA PLVGGTQEFAGEHLAMLSGFSPALLAKMLFYLERCDGAVI VMDVFRYVADSNQTDVPCNLCTFDTRHACVHTTLMRLRAR HPKFASAARGAIGVFGTMNSMYSDCDVLGNYAETYRAATE RVMAELETLQYVDQAVPTAMGRLETIITNREALHTVVNNV RQVVDREVEQLMRNLVEFKFRDGLGEANHAMSLTLDPYAC GPCPLLQLLGRRSNLAVYQDLALSQCHGVFAGQSVEGRNF RNQFQPVLRRRVMDMFNNGFLSAKTLTVALSEGAAICAPS LTAGQTAPAESSFEGDVARVTLGFPKELRVKSRVLFSAYQ KPDKRVDILLGPLGFLLKQFHAAIFPNGKPPGSNQPNPQW FWTALQRNQLPARLLSREDIETIAFIKKFSLDYGAINFIN LAPNNVSELAMYYMANQILRYCDHSTYFINTLTAIIAGSR RPPSVQAAAAWSAQGGAGLEAGARALMDAVDAHPGAWTSM FASCNLLRPVMAARPMVVLGLSISKYVFQAGNWASLMGGK NACPLLIFDRTRKFVLACPRAGFVCAASSLCEQLRGIISE GGAAVASSVFVATVKSLGPRTQQLQIEDWLALLEDEYLSE EMMELTARALERGNGEWSTDAALEVAHEAEA Description (1)  MAJOR DNA-BINDING PROTEIN Functional site 1) chain A residue 499 type sequence C description BINDING SITE FOR RESIDUE ZN A2131 source : AC1 2) chain A residue 502 type sequence C description BINDING SITE FOR RESIDUE ZN A2131 source : AC1 3) chain A residue 510 type sequence C description BINDING SITE FOR RESIDUE ZN A2131 source : AC1 4) chain A residue 512 type sequence H description BINDING SITE FOR RESIDUE ZN A2131 source : AC1 5) chain A residue 917 type sequence I description BINDING SITE FOR RESIDUE HG A2132 source : AC2 6) chain A residue 963 type sequence F description BINDING SITE FOR RESIDUE HG A2132 source : AC2 7) chain A residue 1013 type sequence C description BINDING SITE FOR RESIDUE HG A2132 source : AC2 8) chain A residue 1026 type sequence L description BINDING SITE FOR RESIDUE HG A2132 source : AC2 9) chain A residue 597 type sequence P description BINDING SITE FOR RESIDUE HG A2133 source : AC3 10) chain A residue 966 type sequence C description BINDING SITE FOR RESIDUE HG A2133 source : AC3 11) chain A residue 26 type sequence C description BINDING SITE FOR RESIDUE HG A2134 source : AC4 12) chain A residue 154 type sequence R description BINDING SITE FOR RESIDUE HG A2134 source : AC4 13) chain A residue 740 type sequence C description BINDING SITE FOR RESIDUE HG A2135 source : AC5 14) chain A residue 754 type sequence S description BINDING SITE FOR RESIDUE HG A2135 source : AC5 15) chain B residue 499 type sequence C description BINDING SITE FOR RESIDUE ZN B2131 source : AC6 16) chain B residue 502 type sequence C description BINDING SITE FOR RESIDUE ZN B2131 source : AC6 17) chain B residue 510 type sequence C description BINDING SITE FOR RESIDUE ZN B2131 source : AC6 18) chain B residue 512 type sequence H description BINDING SITE FOR RESIDUE ZN B2131 source : AC6 19) chain B residue 917 type sequence I description BINDING SITE FOR RESIDUE HG B2132 source : AC7 20) chain B residue 963 type sequence F description BINDING SITE FOR RESIDUE HG B2132 source : AC7 21) chain B residue 1013 type sequence C description BINDING SITE FOR RESIDUE HG B2132 source : AC7 22) chain B residue 1026 type sequence L description BINDING SITE FOR RESIDUE HG B2132 source : AC7 23) chain B residue 966 type sequence C description BINDING SITE FOR RESIDUE HG B2133 source : AC8 24) chain B residue 972 type sequence V description BINDING SITE FOR RESIDUE HG B2133 source : AC8 25) chain B residue 26 type sequence C description BINDING SITE FOR RESIDUE HG B2134 source : AC9 26) chain B residue 27 type sequence P description BINDING SITE FOR RESIDUE HG B2134 source : AC9 27) chain B residue 740 type sequence C description BINDING SITE FOR RESIDUE HG B2135 source : BC1 28) chain B residue 752 type sequence A description BINDING SITE FOR RESIDUE HG B2135 source : BC1 29) chain B residue 754 type sequence S description BINDING SITE FOR RESIDUE HG B2135 source : BC1 30) chain A residue 499-512 type ZN_FING sequence CNLCTFDTRHACVH description ZN_FING => ECO:0000255|HAMAP-Rule:MF_04007 source Swiss-Prot : SWS_FT_FI1 31) chain B residue 499-512 type ZN_FING sequence CNLCTFDTRHACVH description ZN_FING => ECO:0000255|HAMAP-Rule:MF_04007 source Swiss-Prot : SWS_FT_FI1

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