eF-site ID 1u04-A
PDB Code 1u04
Chain A

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Title Crystal structure of full length Argonaute from Pyrococcus furiosus
Classification HYDROLASE/GENE REGULATION
Compound hypothetical protein PF0537
Source Pyrococcus furiosus (strain ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) (Q8U3D2_PYRFU)
Sequence A:  SXKAIVVINLVKINKKIIPDKIYVYRLYSIYRLAYENVGI
VIDPENLIIATTKELEYEGEFIPEGEISFSELRNDYQSKL
VLRLLKENGIGEYELSKLLRKFRKPKTFGDYKVIPSVEXS
VIKHDEDFYLVIHIIHQIQSXKTLWELVNKDPKELEEFLX
THKENLXLKDIASPLKTVYKPCFEEYTKKPKLDHNQEIVK
YWYNYHIERYWNTPEAKLEFYRKFGQVDLKQPAILAKFAS
KNYKIYLLPQLVVPTYNAEQLAKEILEYTKLXPEERKELL
ENILAEVDSDIIDKSLSEIEVEKIAQELENKIRVRDDKGN
SVPISQLLWTNYSRKYPVILPYEVPEKFRKIREIPXFIIL
DSGLLADIQNFATNEFRELVKSXYYEKVITEDLNSDKGII
EVVEQVSSFXKGKELGLAFIAARNKLSSEKFEEIKRRLFN
LNVISQVVNEDTLKNKRDKYDRNRLDLFVRHNLLFQVLSK
LGVKYYVLDYRFNYDYIIGIDVAPXKRSEGYIGGSAVXFD
SQGYIRKIVPIKIGEQRGESVDXNEFFKEXVDKFKEFNIK
LDNKKILLLRDGRITNNEEEGLKYISEXFDIEVVTXDVIK
NHPVRAFANXKXYFNLGGAIYLIPHKLKQAKGTPIPIKLA
KKRIIKNGKVEKQSITRQDVLDIFILTRLNYGSISADXRL
PAPVHYAHKFANAIRNEWKIKEEFLAEGFLYFV
Description


Functional site

1) chain A
residue 558
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000305|PubMed:15284453, ECO:0000305|PubMed:15800637
source Swiss-Prot : SWS_FT_FI1

2) chain A
residue 628
type ACT_SITE
sequence D
description ACT_SITE => ECO:0000305|PubMed:15284453, ECO:0000305|PubMed:15800637
source Swiss-Prot : SWS_FT_FI1

3) chain A
residue 596
type ACT_SITE
sequence E
description ACT_SITE => ECO:0000250|UniProtKB:Q746M7
source Swiss-Prot : SWS_FT_FI2

4) chain A
residue 745
type ACT_SITE
sequence H
description ACT_SITE => ECO:0000305|PubMed:15800637
source Swiss-Prot : SWS_FT_FI3

5) chain A
residue 558
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:Q746M7
source Swiss-Prot : SWS_FT_FI4

6) chain A
residue 770
type BINDING
sequence V
description BINDING => ECO:0000250|UniProtKB:Q746M7
source Swiss-Prot : SWS_FT_FI4

7) chain A
residue 628
type BINDING
sequence D
description BINDING => ECO:0000250|UniProtKB:Q746M7, ECO:0000269|PubMed:15800637, ECO:0007744|PDB:1Z25
source Swiss-Prot : SWS_FT_FI5

8) chain A
residue 745
type BINDING
sequence H
description BINDING => ECO:0000269|PubMed:15800637, ECO:0007744|PDB:1Z25
source Swiss-Prot : SWS_FT_FI6


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