eF-site ID 1twf-A PDB Code 1twf Chain A click to enlarge Title RNA polymerase II complexed with UTP at 2.3 A resolution Classification TRANSCRIPTION Compound DNA-directed RNA polymerase II largest subunit Source ORGANISM_COMMON: baker's yeast; ORGANISM_SCIENTIFIC: Saccharomyces cerevisiae; Sequence A:  VGQQYSSAPLRTVKEVQFGLFSPEEVRAISVAKIRFPETM DETQTRAKIGGLNDPRLGSIDRNLKCQTCQEGMNECPGHF GHIDLAKPVFHVGFIAKIKKVCECVCMHCGKLLLDEHNEL MRQALAIKDSKKRFAAIWTLCKTKMVCETDVPSEDDPTQL VSRGGCGNTQPTIRKDGLKLVGSWKKDRATGDADEPELRV LSTEEILNIFKHISVKDFTSLGFNEVFSRPEWMILTCLPV PPPPVRPSISFNESQRGEDDLTFKLADILKANISLETLEH NGAPHHAIEEAESLLQFHVATYMDNDIAGQPQALQKSGRP VKSIRARLKGKEGRIRGNLMGKRVDFSARTVISGDPNLEL DQVGVPKSIAKTLTYPEVVTPYNIDRLTQLVRNGPNEHPG AKYVIRDSGDRIDLRYSKRAGDIQLQYGWKVERHIMDNDP VLFNRQPSLHKMSMMAHRVKVIPYSTFRLNLSVTSPYNAD FDGDEMNLHVPQSEETRAELSQLCAVPLQIVSPQSNKPCM GIVQDTLCGIRKLTLRDTFIELDQVLNMLYWVPDWDGVIP TPAIIKPKPLWSGKQILSVAIPNGIHLQRFDEGTTLLSPK DNGMLIIDGQIIFGVVEKKTVGSSNGGLIHVVTREKGPQV CAKLFGNIQKVVNFWLLHNGFSTGIGDTIADGPTMREITE TIAEAKKKVLDVTKEAQANLLTAKHGMTLRESFEDNVVRF LNEARDKAGRLAEVNLKDLNNVKQMVMAGSKGSFINIAQM SACVGQQSVEGKRIAFGFVDRTLPHFSKDDYSPESKGFVE NSYLRGLTPQEFFFHAMGGREGLIDTAVKTAETGYIQRRL VKALEDIMVHYDNTTRNSLGNVIQFIYGEDGMDAAHIEKQ SLDTIGGSDAAFEKRYRVDLLNTDHTLDPSLLESGSEILG DLKLQVLLDEEYKQLVKDRKFLREVFVDGEANWPLPVNIR RIIQNAQQTFHIDHTKPSDLTIKDIVLGVKDLQENLLVLR GKNEIIQNAQRDAVTLFCCLLRSRLATRRVLQEYRLTKQA FDWVLSNIEAQFLRSVVHPGEMVGVLAAQSIGEPATQMTL KKVTSGVPRLKEILNVAKNMKTPSLTVYLEPGHAADQEQA KLIRSAIEHTTLKSVTIASEIYYDPDPRSTVIPEDEEIIQ LHFSLQQSPWLLRLELDRAAMNDKDLTMGQVGERIKQTFK NDLFVIWSEDNDEKLIIRCRVVAEEDHMLKKIENTMLENI TLRGVENIERVVMMKYDRKVPSPTGEYVKEPEWVLETDGV NLSEVMTVPGIDPTRIYTNSFIDIMEVLGIEAGRAALYKE VYNVIASDGSYVNYRHMALLVDVMTTQGGLTSVTRHGFNR SNTGALMRCSFEETVEILFEAGASAELDDCRGVSENVILG QMAPIGTGAFDVMIDEESL Description Functional site 1) chain A residue 107 type sequence C description BINDING SITE FOR RESIDUE ZN A 3006 source : AC6 2) chain A residue 110 type sequence C description BINDING SITE FOR RESIDUE ZN A 3006 source : AC6 3) chain A residue 148 type sequence C description BINDING SITE FOR RESIDUE ZN A 3006 source : AC6 4) chain A residue 167 type sequence C description BINDING SITE FOR RESIDUE ZN A 3006 source : AC6 5) chain A residue 67 type sequence C description BINDING SITE FOR RESIDUE ZN A 3008 source : AC8 6) chain A residue 70 type sequence C description BINDING SITE FOR RESIDUE ZN A 3008 source : AC8 7) chain A residue 77 type sequence C description BINDING SITE FOR RESIDUE ZN A 3008 source : AC8 8) chain A residue 80 type sequence H description BINDING SITE FOR RESIDUE ZN A 3008 source : AC8 9) chain A residue 481 type sequence D description BINDING SITE FOR RESIDUE MN A 3009 source : AC9 10) chain A residue 483 type sequence D description BINDING SITE FOR RESIDUE MN A 3009 source : AC9 11) chain A residue 485 type sequence D description BINDING SITE FOR RESIDUE MN A 3009 source : AC9 12) chain A residue 481 type sequence D description BINDING SITE FOR RESIDUE MN A 3010 source : BC1 13) chain A residue 483 type sequence D description BINDING SITE FOR RESIDUE MN A 3010 source : BC1 14) chain A residue 481 type sequence D description BINDING SITE FOR RESIDUE UTP B 3571 source : BC2 15) chain A residue 483 type sequence D description BINDING SITE FOR RESIDUE UTP B 3571 source : BC2 16) chain A residue 485 type sequence D description BINDING SITE FOR RESIDUE UTP B 3571 source : BC2 17) chain A residue 483 type catalytic sequence D description 788 source MCSA : MCSA1 18) chain A residue 485 type catalytic sequence D description 788 source MCSA : MCSA1 19) chain A residue 483 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1 20) chain A residue 485 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1 21) chain A residue 107 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 22) chain A residue 110 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 23) chain A residue 148 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 24) chain A residue 167 type ZN_FING sequence C description C4-type source Swiss-Prot : SWS_FT_FI1 25) chain A residue 481 type ZN_FING sequence D description C4-type source Swiss-Prot : SWS_FT_FI1

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